[PortPather] add default_spacing (.at(..., spacing=...))

examples/generate_gds_perf.py

@@ -0,0 +1,5 @@
+from masque.file.gdsii_perf import main
+
+
+if __name__ == '__main__':
+    raise SystemExit(main())

examples/profile_gdsii_readers.py

@@ -0,0 +1,131 @@
+from __future__ import annotations
+
+import argparse
+import importlib
+import json
+import time
+from pathlib import Path
+from typing import Any
+
+from masque import LibraryError
+
+
+READERS: dict[str, tuple[str, tuple[str, ...]]] = {
+    'gdsii': ('masque.file.gdsii', ('readfile',)),
+    'gdsii_arrow': ('masque.file.gdsii_arrow', ('readfile', 'arrow_import', 'arrow_convert')),
+    }
+
+
+def _summarize_library(path: Path, elapsed_s: float, info: dict[str, object], lib: object) -> dict[str, object]:
+    assert hasattr(lib, '__len__')
+    assert hasattr(lib, 'tops')
+    tops = lib.tops()      # type: ignore[no-any-return, attr-defined]
+    try:
+        unique_top = lib.top()      # type: ignore[no-any-return, attr-defined]
+    except LibraryError:
+        unique_top = None
+
+    return {
+        'path': str(path),
+        'elapsed_s': elapsed_s,
+        'library_name': info['name'],
+        'cell_count': len(lib),     # type: ignore[arg-type]
+        'topcells': tops,
+        'topcell': unique_top,
+        }
+
+
+def _summarize_arrow_import(path: Path, elapsed_s: float, arrow_arr: Any) -> dict[str, object]:
+    libarr = arrow_arr[0]
+    return {
+        'path': str(path),
+        'elapsed_s': elapsed_s,
+        'arrow_rows': len(arrow_arr),
+        'library_name': libarr['lib_name'].as_py(),
+        'cell_count': len(libarr['cells']),
+        'layer_count': len(libarr['layers']),
+        }
+
+
+def _profile_stage(module: Any, stage: str, path: Path) -> dict[str, object]:
+    start = time.perf_counter()
+
+    if stage == 'readfile':
+        lib, info = module.readfile(path)
+        elapsed_s = time.perf_counter() - start
+        return _summarize_library(path, elapsed_s, info, lib)
+
+    if stage == 'arrow_import':
+        if hasattr(module, 'readfile_arrow'):
+            libarr, _info = module.readfile_arrow(path)
+            elapsed_s = time.perf_counter() - start
+            return {
+                'path': str(path),
+                'elapsed_s': elapsed_s,
+                'arrow_rows': 1,
+                'library_name': libarr['lib_name'].as_py(),
+                'cell_count': len(libarr['cells']),
+                'layer_count': len(libarr['layers']),
+                }
+
+        arrow_arr = module._read_to_arrow(path)
+        elapsed_s = time.perf_counter() - start
+        return _summarize_arrow_import(path, elapsed_s, arrow_arr)
+
+    if stage == 'arrow_convert':
+        arrow_arr = module._read_to_arrow(path)
+        libarr = arrow_arr[0]
+        start = time.perf_counter()
+        lib, info = module.read_arrow(libarr)
+        elapsed_s = time.perf_counter() - start
+        return _summarize_library(path, elapsed_s, info, lib)
+
+    raise ValueError(f'Unsupported stage {stage!r}')
+
+
+def build_arg_parser() -> argparse.ArgumentParser:
+    parser = argparse.ArgumentParser(description='Profile GDS readers with a stable end-to-end workload.')
+    parser.add_argument('--reader', choices=sorted(READERS), required=True)
+    parser.add_argument('--stage', default='readfile')
+    parser.add_argument('--path', type=Path, required=True)
+    parser.add_argument('--warmup', type=int, default=1)
+    parser.add_argument('--repeat', type=int, default=1)
+    parser.add_argument('--output-json', type=Path)
+    return parser
+
+
+def main(argv: list[str] | None = None) -> int:
+    parser = build_arg_parser()
+    args = parser.parse_args(argv)
+
+    module_name, stages = READERS[args.reader]
+    if args.stage not in stages:
+        parser.error(f'reader {args.reader!r} only supports stages: {", ".join(stages)}')
+
+    module = importlib.import_module(module_name)
+    path = args.path.expanduser().resolve()
+
+    for _ in range(args.warmup):
+        _profile_stage(module, args.stage, path)
+
+    runs = []
+    for _ in range(args.repeat):
+        runs.append(_profile_stage(module, args.stage, path))
+
+    payload = {
+        'reader': args.reader,
+        'stage': args.stage,
+        'warmup': args.warmup,
+        'repeat': args.repeat,
+        'runs': runs,
+        }
+    rendered = json.dumps(payload, indent=2, sort_keys=True)
+    if args.output_json is not None:
+        args.output_json.parent.mkdir(parents=True, exist_ok=True)
+        args.output_json.write_text(rendered + '\n')
+    print(rendered)
+    return 0
+
+
+if __name__ == '__main__':
+    raise SystemExit(main())

examples/tutorial/README.md

@@ -20,10 +20,10 @@ Contents
     * Use `Pather` to snap ports together into a circuit
     * Check for dangling references
 - [library](library.py)
-    * Continue from `devices.py` using a lazy library
+    * Continue from `devices.py` by declaring a mixed library with `BuildLibrary`
-    * Create a `LazyLibrary`, which loads / generates patterns only when they are first used
+    * Import source-backed GDS cells and register python-generated recipes together
+    * Call `build()` to produce a normal library and report for downstream `Pather` usage and writing
     * Explore alternate ways of specifying a pattern for `.plug()` and `.place()`
-    * Design a pattern which is meant to plug into an existing pattern (via `.interface()`)
 - [pather](pather.py)
     * Use `Pather` to route individual wires and wire bundles
     * Use `AutoTool` to generate paths

examples/tutorial/library.py

@@ -1,142 +1,115 @@
 """
-Tutorial: using `LazyLibrary` and `Pather.interface()`.
+Tutorial: authoring a mixed library with `BuildLibrary`.
 
 This example assumes you have already read `devices.py` and generated the
 `circuit.gds` file it writes. The goal here is not the photonic-crystal geometry
-itself, but rather how Masque lets you mix lazily loaded GDS content with
+itself, but rather how Masque lets you combine imported GDS cells with
-python-generated devices inside one library.
+python-generated recipes, then turn that declaration set into a normal library
+for downstream assembly and writing.
 """
 from typing import Any
 from pprint import pformat
 
 
-from masque import Pather, LazyLibrary
+from masque import BuildLibrary, Pather, Pattern, cell
-from masque.file.gdsii import writefile, load_libraryfile
+from masque.file.gdsii import writefile
+from masque.file.gdsii_lazy import readfile
 
 import basic_shapes
 import devices
-from devices import data_to_ports
 from basic_shapes import GDS_OPTS
 
 
+def make_mixed_waveguide(lib: BuildLibrary) -> Pattern:
+    """
+    Recipe which assembles imported and generated cells behind the builder API.
+    """
+    circ = Pather(library=lib, ports='tri_l3cav')
+
+    # First way to specify what we are plugging in: request an explicit abstract.
+    circ.plug(lib.abstract('wg10'), {'input': 'right'})
+
+    # Second way: use an AbstractView, which behaves like a mapping of names
+    # to abstracts.
+    abstracts = lib.abstract_view()
+    circ.plug(abstracts['wg10'], {'output': 'left'})
+
+    # Third way: let Pather resolve a pattern name through its own library.
+    circ.plug('tri_wg10', {'input': 'right'})
+    circ.plug('tri_wg10', {'output': 'left'})
+
+    return circ.pattern
+
+
 def main() -> None:
-    # A `LazyLibrary` delays work until a pattern is actually needed.
+    builder = BuildLibrary()
-    # That applies both to GDS cells we load from disk and to python callables
+    cells = builder.cells
-    # that generate patterns on demand.
-    lib = LazyLibrary()
 
     #
     # Load some devices from a GDS file
     #
 
-    # Scan circuit.gds and prepare to lazy-load its contents
+    # Scan circuit.gds and prepare to lazy-load its contents. Port labels are
-    gds_lib, _properties = load_libraryfile('circuit.gds', postprocess=data_to_ports)
+    # imported on first materialization, but the raw source remains untouched
+    # until we build the final library.
+    gds_lib, _properties = readfile('circuit.gds')
+    builder.add_source(gds_lib.with_ports_from_data(layers=[(3, 0)], max_depth=1))
 
-    # Add those cells into our lazy library.
+    print('Registered imported cells:\n' + pformat(list(gds_lib.keys())))
-    # Nothing is read yet; we are only registering how to fetch and postprocess
-    # each pattern when it is first requested.
-    lib.add(gds_lib)
-
-    print('Patterns loaded from GDS into library:\n' + pformat(list(lib.keys())))
 
     #
-    # Add some new devices to the library, this time from python code rather than GDS
+    # Register some new devices, this time from python code rather than GDS.
     #
 
-    lib['triangle'] = lambda: basic_shapes.triangle(devices.RADIUS)
+    cells.triangle = basic_shapes.triangle(devices.RADIUS)
     opts: dict[str, Any] = dict(
-        lattice_constant = devices.LATTICE_CONSTANT,
+        lattice_constant=devices.LATTICE_CONSTANT,
-        hole = 'triangle',
+        hole='triangle',
-        )
+    )
 
-    # Triangle-based variants. These lambdas are only recipes for building the
+    cells.tri_wg10 = cell(devices.waveguide)(length=10, mirror_periods=5, **opts)
-    # patterns; they do not execute until someone asks for the cell.
+    cells.tri_wg05 = cell(devices.waveguide)(length=5, mirror_periods=5, **opts)
-    lib['tri_wg10'] = lambda: devices.waveguide(length=10, mirror_periods=5, **opts)
+    cells.tri_wg28 = cell(devices.waveguide)(length=28, mirror_periods=5, **opts)
-    lib['tri_wg05'] = lambda: devices.waveguide(length=5, mirror_periods=5, **opts)
+    cells.tri_bend0 = cell(devices.bend)(mirror_periods=5, **opts)
-    lib['tri_wg28'] = lambda: devices.waveguide(length=28, mirror_periods=5, **opts)
+    cells.tri_ysplit = cell(devices.y_splitter)(mirror_periods=5, **opts)
-    lib['tri_bend0'] = lambda: devices.bend(mirror_periods=5, **opts)
+    cells.tri_l3cav = cell(devices.perturbed_l3)(xy_size=(4, 10), **opts, hole_lib=builder)
-    lib['tri_ysplit'] = lambda: devices.y_splitter(mirror_periods=5, **opts)
+    cells.mixed_wg_cav = cell(make_mixed_waveguide)(builder)
-    lib['tri_l3cav'] = lambda: devices.perturbed_l3(xy_size=(4, 10), **opts, hole_lib=lib)
+
+    print('Declared cells waiting to be built:\n' + pformat(list(builder.keys())))
 
     #
-    # Build a mixed waveguide with an L3 cavity in the middle
+    # Build the declaration set into a normal library.
     #
 
-    # Start a new design by copying the ports from an existing library cell.
+    built, report = builder.build()
-    # This gives `circ2` the same external interface as `tri_l3cav`.
+    print('Built library contains:\n' + pformat(list(built.keys())))
-    circ2 = Pather(library=lib, ports='tri_l3cav')
+    print('Build dependency graph:\n' + pformat(report.dependency_graph))
-
-    # First way to specify what we are plugging in: request an explicit abstract.
-    # This works with `Pattern` methods directly as well as with `Pather`.
-    circ2.plug(lib.abstract('wg10'), {'input': 'right'})
-
-    # Second way: use an `AbstractView`, which behaves like a mapping of names
-    # to abstracts.
-    abstracts = lib.abstract_view()
-    circ2.plug(abstracts['wg10'], {'output': 'left'})
-
-    # Third way: let `Pather` resolve a pattern name through its own library.
-    # This shorthand is convenient, but it is specific to helpers that already
-    # carry a library reference.
-    circ2.plug('tri_wg10', {'input': 'right'})
-    circ2.plug('tri_wg10', {'output': 'left'})
-
-    # Add the circuit to the device library.
-    lib['mixed_wg_cav'] = circ2.pattern
-
 
     #
-    # Build a second device that is explicitly designed to mate with `circ2`.
+    # Continue designing against the built library.
     #
 
-    # `Pather.interface()` makes a new pattern whose ports mirror an existing
+    # The built result behaves like a normal mutable library, so downstream code
-    # design's external interface. That is useful when you want to design an
+    # can use Pather, abstract views, and writing without going back through the
-    # adapter, continuation, or mating structure.
+    # builder interface.
-    circ3 = Pather.interface(source=circ2)
+    circ = Pather.interface(source='mixed_wg_cav', library=built)
-
+    circ.plug('tri_bend0', {'input': 'right'})
-    # Continue routing outward from those inherited ports.
+    circ.plug('tri_bend0', {'input': 'left'}, mirrored=True)   # mirror since no tri y-symmetry
-    circ3.plug('tri_bend0', {'input': 'right'})
+    circ.plug('tri_bend0', {'input': 'right'})
-    circ3.plug('tri_bend0', {'input': 'left'}, mirrored=True) # mirror since no tri y-symmetry
+    circ.plug('bend0', {'output': 'left'})
-    circ3.plug('tri_bend0', {'input': 'right'})
+    circ.plug('bend0', {'output': 'left'})
-    circ3.plug('bend0', {'output': 'left'})
+    circ.plug('bend0', {'output': 'left'})
-    circ3.plug('bend0', {'output': 'left'})
+    circ.plug('tri_wg10', {'input': 'right'})
-    circ3.plug('bend0', {'output': 'left'})
+    circ.plug('tri_wg28', {'input': 'right'})
-    circ3.plug('tri_wg10', {'input': 'right'})
+    circ.plug('tri_wg10', {'input': 'right', 'output': 'left'})
-    circ3.plug('tri_wg28', {'input': 'right'})
+    built['loop_segment'] = circ.pattern
-    circ3.plug('tri_wg10', {'input': 'right', 'output': 'left'})
-
-    lib['loop_segment'] = circ3.pattern
 
     #
-    # Write all devices into a GDS file
+    # Write all devices into a GDS file.
     #
     print('Writing library to file...')
-    writefile(lib, 'library.gds', **GDS_OPTS)
+    writefile(built, 'library.gds', **GDS_OPTS)
 
 
 if __name__ == '__main__':
     main()
-
-
-#
-#class prout:
-#    def place(
-#            self,
-#            other: Pattern,
-#            label_layer: layer_t = 'WATLAYER',
-#            *,
-#            port_map: Dict[str, str | None] | None = None,
-#            **kwargs,
-#            ) -> 'prout':
-#
-#        Pattern.place(self, other, port_map=port_map, **kwargs)
-#        name: str | None
-#        for name in other.ports:
-#            if port_map:
-#                assert(name is not None)
-#                name = port_map.get(name, name)
-#            if name is None:
-#                continue
-#            self.pattern.label(string=name, offset=self.ports[name].offset, layer=label_layer)
-#        return self
-#

examples/tutorial/port_pather.py

@@ -54,9 +54,10 @@ def main() -> None:
     (rpather.at(['GND', 'VCC'])
         .trace(True, xmax=-10_000, spacing=5_000)   # Move West to -10k, turn South
         .retool(M1_tool)                            # Retools both GND and VCC
-        .trace(True, emax=50_000, spacing=1_200)    # Turn East, moves 50um extension
+        .set_spacing(1_200)                         # Default bundle spacing for later bends
-        .trace(False, emin=1_000, spacing=1_200)    # U-turn back South
+        .trace(True, emax=50_000)                   # Turn East, moves 50um extension
-        .trace(False, emin=2_000, spacing=4_500)    # U-turn back West
+        .trace(False, emin=1_000)                   # U-turn back South
+        .trace(False, emin=2_000, spacing=4_500)    # U-turn back West, overriding the default spacing
         )
 
     # Retool VCC back to M2 and move both to x=-28k

masque/__init__.py

@@ -42,6 +42,7 @@ from .error import (
 from .shapes import (
     Shape as Shape,
     Polygon as Polygon,
+    RectCollection as RectCollection,
     Path as Path,
     Circle as Circle,
     Arc as Arc,
@@ -62,10 +63,14 @@ from .library import (
     ILibrary as ILibrary,
     LibraryView as LibraryView,
     Library as Library,
+    BuildLibrary as BuildLibrary,
+    BuildReport as BuildReport,
+    CellProvenance as CellProvenance,
     LazyLibrary as LazyLibrary,
     AbstractView as AbstractView,
     TreeView as TreeView,
     Tree as Tree,
+    cell as cell,
     )
 from .ports import (
     Port as Port,

masque/builder/pather.py

@@ -1173,30 +1173,50 @@ class Pather(PortList):
         self.pattern.flatten(self.library)
         return self
 
-    def at(self, portspec: str | Iterable[str]) -> 'PortPather':
+    def at(
-        return PortPather(portspec, self)
+            self,
+            portspec: str | Iterable[str],
+            *,
+            spacing: float | ArrayLike | None = None,
+            ) -> 'PortPather':
+        return PortPather(portspec, self, default_spacing=spacing)
 
 
 class PortPather:
     """ Port state manager for fluent pathing. """
-    def __init__(self, ports: str | Iterable[str], pather: Pather) -> None:
+    def __init__(
+            self,
+            ports: str | Iterable[str],
+            pather: Pather,
+            *,
+            default_spacing: float | ArrayLike | None = None,
+            ) -> None:
         self.ports = [ports] if isinstance(ports, str) else list(ports)
         self.pather = pather
+        self.default_spacing = default_spacing
 
     def retool(self, tool: Tool) -> Self:
         self.pather.retool(tool, self.ports)
         return self
 
+    def set_spacing(self, spacing: float | ArrayLike | None) -> Self:
+        self.default_spacing = spacing
+        return self
+
     @contextmanager
     def toolctx(self, tool: Tool) -> Iterator[Self]:
         with self.pather.toolctx(tool, keys=self.ports):
             yield self
 
     def trace(self, ccw: SupportsBool | None, length: float | None = None, **kw: Any) -> Self:
+        if 'spacing' not in kw and self.default_spacing is not None and len(self.ports) > 1 and ccw is not None:
+            kw['spacing'] = self.default_spacing
         self.pather.trace(self.ports, ccw, length, **kw)
         return self
 
     def trace_to(self, ccw: SupportsBool | None, **kw: Any) -> Self:
+        if 'spacing' not in kw and self.default_spacing is not None and len(self.ports) > 1 and ccw is not None:
+            kw['spacing'] = self.default_spacing
         self.pather.trace_to(self.ports, ccw, **kw)
         return self
 

masque/file/gdsii.py

@@ -22,8 +22,6 @@ Notes:
 from typing import IO, cast, Any
 from collections.abc import Iterable, Mapping, Callable
 from types import MappingProxyType
-import io
-import mmap
 import logging
 import pathlib
 import gzip
@@ -37,10 +35,10 @@ from klamath import records
 
 from .utils import is_gzipped, tmpfile
 from .. import Pattern, Ref, PatternError, LibraryError, Label, Shape
-from ..shapes import Polygon, Path
+from ..shapes import Polygon, Path, RectCollection
 from ..repetition import Grid
 from ..utils import layer_t, annotations_t
-from ..library import LazyLibrary, Library, ILibrary, ILibraryView
+from ..library import Library, ILibrary
 
 
 logger = logging.getLogger(__name__)
@@ -323,26 +321,40 @@ def _gpath_to_mpath(gpath: klamath.library.Path, raw_mode: bool) -> tuple[layer_
     else:
         raise PatternError(f'Unrecognized path type: {gpath.path_type}')
 
-    mpath = Path(
+    vertices = gpath.xy.astype(float)
-        vertices=gpath.xy.astype(float),
+    annotations = _properties_to_annotations(gpath.properties)
-        width=gpath.width,
+    cap_extensions = None
-        cap=cap,
-        offset=numpy.zeros(2),
-        annotations=_properties_to_annotations(gpath.properties),
-        raw=raw_mode,
-        )
     if cap == Path.Cap.SquareCustom:
-        mpath.cap_extensions = gpath.extension
+        cap_extensions = numpy.asarray(gpath.extension, dtype=float)
+
+    if raw_mode:
+        mpath = Path._from_raw(
+            vertices=vertices,
+            width=gpath.width,
+            cap=cap,
+            cap_extensions=cap_extensions,
+            annotations=annotations,
+            )
+    else:
+        mpath = Path(
+            vertices=vertices,
+            width=gpath.width,
+            cap=cap,
+            cap_extensions=cap_extensions,
+            offset=numpy.zeros(2),
+            annotations=annotations,
+            )
     return gpath.layer, mpath
 
 
 def _boundary_to_polygon(boundary: klamath.library.Boundary, raw_mode: bool) -> tuple[layer_t, Polygon]:
-    return boundary.layer, Polygon(
+    vertices = boundary.xy[:-1].astype(float)
-        vertices=boundary.xy[:-1].astype(float),
+    annotations = _properties_to_annotations(boundary.properties)
-        offset=numpy.zeros(2),
+    if raw_mode:
-        annotations=_properties_to_annotations(boundary.properties),
+        poly = Polygon._from_raw(vertices=vertices, annotations=annotations)
-        raw=raw_mode,
+    else:
-        )
+        poly = Polygon(vertices=vertices, offset=numpy.zeros(2), annotations=annotations)
+    return boundary.layer, poly
 
 
 def _mrefs_to_grefs(refs: dict[str | None, list[Ref]]) -> list[klamath.library.Reference]:
@@ -466,6 +478,20 @@ def _shapes_to_elements(
                     properties=properties,
                     )
                 elements.append(path)
+            elif isinstance(shape, RectCollection):
+                for rect in shape.rects:
+                    xy_closed = numpy.empty((5, 2), dtype=numpy.int32)
+                    xy_closed[0] = rint_cast((rect[0], rect[1]))
+                    xy_closed[1] = rint_cast((rect[0], rect[3]))
+                    xy_closed[2] = rint_cast((rect[2], rect[3]))
+                    xy_closed[3] = rint_cast((rect[2], rect[1]))
+                    xy_closed[4] = xy_closed[0]
+                    boundary = klamath.elements.Boundary(
+                        layer=(layer, data_type),
+                        xy=xy_closed,
+                        properties=properties,
+                        )
+                    elements.append(boundary)
             elif isinstance(shape, Polygon):
                 polygon = shape
                 xy_closed = numpy.empty((polygon.vertices.shape[0] + 1, 2), dtype=numpy.int32)
@@ -514,117 +540,6 @@ def _labels_to_texts(labels: dict[layer_t, list[Label]]) -> list[klamath.element
     return texts
 
 
-def load_library(
-        stream: IO[bytes],
-        *,
-        full_load: bool = False,
-        postprocess: Callable[[ILibraryView, str, Pattern], Pattern] | None = None
-        ) -> tuple[LazyLibrary, dict[str, Any]]:
-    """
-    Scan a GDSII stream to determine what structures are present, and create
-        a library from them. This enables deferred reading of structures
-        on an as-needed basis.
-    All structures are loaded as secondary
-
-    Args:
-        stream: Seekable stream. Position 0 should be the start of the file.
-            The caller should leave the stream open while the library
-            is still in use, since the library will need to access it
-            in order to read the structure contents.
-        full_load: If True, force all structures to be read immediately rather
-            than as-needed. Since data is read sequentially from the file, this
-            will be faster than using the resulting library's `precache` method.
-        postprocess: If given, this function is used to post-process each
-            pattern *upon first load only*.
-
-    Returns:
-        LazyLibrary object, allowing for deferred load of structures.
-        Additional library info (dict, same format as from `read`).
-    """
-    stream.seek(0)
-    lib = LazyLibrary()
-
-    if full_load:
-        # Full load approach (immediately load everything)
-        patterns, library_info = read(stream)
-        for name, pattern in patterns.items():
-            if postprocess is not None:
-                lib[name] = postprocess(lib, name, pattern)
-            else:
-                lib[name] = pattern
-        return lib, library_info
-
-    # Normal approach (scan and defer load)
-    library_info = _read_header(stream)
-    structs = klamath.library.scan_structs(stream)
-
-    for name_bytes, pos in structs.items():
-        name = name_bytes.decode('ASCII')
-
-        def mkstruct(pos: int = pos, name: str = name) -> Pattern:
-            stream.seek(pos)
-            pat = read_elements(stream, raw_mode=True)
-            if postprocess is not None:
-                pat = postprocess(lib, name, pat)
-            return pat
-
-        lib[name] = mkstruct
-
-    return lib, library_info
-
-
-def load_libraryfile(
-        filename: str | pathlib.Path,
-        *,
-        use_mmap: bool = True,
-        full_load: bool = False,
-        postprocess: Callable[[ILibraryView, str, Pattern], Pattern] | None = None
-        ) -> tuple[LazyLibrary, dict[str, Any]]:
-    """
-    Wrapper for `load_library()` that takes a filename or path instead of a stream.
-
-    Will automatically decompress the file if it is gzipped.
-
-    NOTE that any streams/mmaps opened will remain open until ALL of the
-     `PatternGenerator` objects in the library are garbage collected.
-
-    Args:
-        path: filename or path to read from
-        use_mmap: If `True`, will attempt to memory-map the file instead
-                  of buffering. In the case of gzipped files, the file
-                  is decompressed into a python `bytes` object in memory
-                  and reopened as an `io.BytesIO` stream.
-        full_load: If `True`, immediately loads all data. See `load_library`.
-        postprocess: Passed to `load_library`
-
-    Returns:
-        LazyLibrary object, allowing for deferred load of structures.
-        Additional library info (dict, same format as from `read`).
-    """
-    path = pathlib.Path(filename)
-    stream: IO[bytes]
-    if is_gzipped(path):
-        if use_mmap:
-            logger.info('Asked to mmap a gzipped file, reading into memory instead...')
-            gz_stream = gzip.open(path, mode='rb')      # noqa: SIM115
-            stream = io.BytesIO(gz_stream.read())       # type: ignore
-        else:
-            gz_stream = gzip.open(path, mode='rb')      # noqa: SIM115
-            stream = io.BufferedReader(gz_stream)       # type: ignore
-    else:       # noqa: PLR5501
-        if use_mmap:
-            base_stream = path.open(mode='rb', buffering=0)                         # noqa: SIM115
-            stream = mmap.mmap(base_stream.fileno(), 0, access=mmap.ACCESS_READ)    # type: ignore
-        else:
-            stream = path.open(mode='rb')          # noqa: SIM115
-
-    try:
-        return load_library(stream, full_load=full_load, postprocess=postprocess)
-    finally:
-        if full_load:
-            stream.close()
-
-
 def check_valid_names(
         names: Iterable[str],
         max_length: int = 32,

masque/file/gdsii_arrow.py

@@ -0,0 +1,882 @@
+# ruff: noqa: ARG001, F401
+"""
+GDSII file format readers and writers using the `TODO` library.
+
+Note that GDSII references follow the same convention as `masque`,
+  with this order of operations:
+   1. Mirroring
+   2. Rotation
+   3. Scaling
+   4. Offset and array expansion (no mirroring/rotation/scaling applied to offsets)
+
+  Scaling, rotation, and mirroring apply to individual instances, not grid
+   vectors or offsets.
+
+Notes:
+ * absolute positioning is not supported
+ * PLEX is not supported
+ * ELFLAGS are not supported
+ * GDS does not support library- or structure-level annotations
+ * GDS creation/modification/access times are set to 1900-01-01 for reproducibility.
+ * Gzip modification time is set to 0 (start of current epoch, usually 1970-01-01)
+
+ TODO writing
+ TODO warn on boxes, nodes
+"""
+from typing import IO, cast, Any
+from collections.abc import Iterable, Mapping, Callable
+from importlib.machinery import EXTENSION_SUFFIXES
+import importlib.util
+import mmap
+import logging
+import os
+import pathlib
+import gzip
+import string
+import sys
+import tempfile
+from pprint import pformat
+
+from klamath.basic import KlamathError
+import numpy
+from numpy.typing import ArrayLike, NDArray
+import pyarrow
+from pyarrow.cffi import ffi
+
+from .utils import is_gzipped, tmpfile
+from .. import Pattern, Ref, PatternError, LibraryError, Label, Shape
+from ..shapes import Polygon, Path, PolyCollection, RectCollection
+from ..repetition import Grid
+from ..utils import layer_t, annotations_t
+from ..library import LazyLibrary, Library, ILibrary, ILibraryView
+
+
+logger = logging.getLogger(__name__)
+
+ffi.cdef(
+    """
+    const char* last_error_message(void);
+    int read_path(const char* path, struct ArrowArray* array, struct ArrowSchema* schema);
+    int scan_bytes(uint8_t* data, size_t size, struct ArrowArray* array, struct ArrowSchema* schema);
+    int read_cells_bytes(
+        uint8_t* data,
+        size_t size,
+        uint64_t* ranges,
+        size_t range_count,
+        struct ArrowArray* array,
+        struct ArrowSchema* schema
+    );
+    """
+)
+
+clib: Any | None = None
+
+
+path_cap_map = {
+    0: Path.Cap.Flush,
+    1: Path.Cap.Circle,
+    2: Path.Cap.Square,
+    4: Path.Cap.SquareCustom,
+    }
+
+
+def rint_cast(val: ArrayLike) -> NDArray[numpy.int32]:
+    return numpy.rint(val).astype(numpy.int32)
+
+
+def _packed_layer_u32_to_pairs(values: NDArray[numpy.unsignedinteger[Any]]) -> NDArray[numpy.int16]:
+    layer = (values >> numpy.uint32(16)).astype(numpy.uint16).view(numpy.int16)
+    dtype = (values & numpy.uint32(0xffff)).astype(numpy.uint16).view(numpy.int16)
+    return numpy.stack((layer, dtype), axis=-1)
+
+
+def _packed_counts_u32_to_pairs(values: NDArray[numpy.unsignedinteger[Any]]) -> NDArray[numpy.int64]:
+    a_count = (values >> numpy.uint32(16)).astype(numpy.uint16).astype(numpy.int64)
+    b_count = (values & numpy.uint32(0xffff)).astype(numpy.uint16).astype(numpy.int64)
+    return numpy.stack((a_count, b_count), axis=-1)
+
+
+def _packed_xy_u64_to_pairs(values: NDArray[numpy.unsignedinteger[Any]]) -> NDArray[numpy.int32]:
+    xx = (values >> numpy.uint64(32)).astype(numpy.uint32).view(numpy.int32)
+    yy = (values & numpy.uint64(0xffff_ffff)).astype(numpy.uint32).view(numpy.int32)
+    return numpy.stack((xx, yy), axis=-1)
+
+
+def _local_library_filename() -> str:
+    if sys.platform.startswith('linux'):
+        return 'libklamath_rs_ext.so'
+    if sys.platform == 'darwin':
+        return 'libklamath_rs_ext.dylib'
+    if sys.platform == 'win32':
+        return 'klamath_rs_ext.dll'
+    raise OSError(f'Unsupported platform for klamath_rs_ext: {sys.platform!r}')
+
+
+def _installed_library_candidates() -> list[pathlib.Path]:
+    candidates: list[pathlib.Path] = []
+
+    try:
+        spec = importlib.util.find_spec('klamath_rs_ext.klamath_rs_ext')
+    except ModuleNotFoundError:
+        spec = None
+    if spec is not None and spec.origin is not None:
+        candidates.append(pathlib.Path(spec.origin))
+
+    try:
+        pkg_spec = importlib.util.find_spec('klamath_rs_ext')
+    except ModuleNotFoundError:
+        pkg_spec = None
+    if pkg_spec is not None and pkg_spec.submodule_search_locations is not None:
+        for location in pkg_spec.submodule_search_locations:
+            pkg_dir = pathlib.Path(location)
+            for suffix in EXTENSION_SUFFIXES:
+                candidates.extend(sorted(pkg_dir.glob(f'klamath_rs_ext*{suffix}')))
+
+    return candidates
+
+
+def _repo_library_candidates() -> list[pathlib.Path]:
+    repo_root = pathlib.Path(__file__).resolve().parents[2]
+    library_name = _local_library_filename()
+    return [
+        repo_root / 'klamath-rs' / 'target' / 'release' / library_name,
+        repo_root / 'klamath-rs' / 'target' / 'debug' / library_name,
+        ]
+
+
+def find_klamath_rs_library() -> pathlib.Path | None:
+    env_path = os.environ.get('KLAMATH_RS_EXT_LIB')
+    if env_path:
+        candidate = pathlib.Path(env_path).expanduser()
+        if candidate.exists():
+            return candidate.resolve()
+
+    seen: set[pathlib.Path] = set()
+    for candidate in _installed_library_candidates() + _repo_library_candidates():
+        resolved = candidate.expanduser()
+        if resolved in seen:
+            continue
+        seen.add(resolved)
+        if resolved.exists():
+            return resolved.resolve()
+    return None
+
+
+def is_available() -> bool:
+    return find_klamath_rs_library() is not None
+
+
+def _get_clib() -> Any:
+    global clib
+    if clib is None:
+        lib_path = find_klamath_rs_library()
+        if lib_path is None:
+            raise ImportError(
+                'Could not locate klamath_rs_ext shared library. '
+                'Build klamath-rs with `cargo build --release --manifest-path klamath-rs/Cargo.toml` '
+                'or set KLAMATH_RS_EXT_LIB to the built library path.'
+                )
+        clib = ffi.dlopen(str(lib_path))
+    return clib
+
+
+def _read_annotations(
+        prop_offs: NDArray[numpy.integer[Any]],
+        prop_key: NDArray[numpy.integer[Any]],
+        prop_val: list[str],
+        ee: int,
+        ) -> annotations_t:
+    prop_ii, prop_ff = prop_offs[ee], prop_offs[ee + 1]
+    if prop_ii >= prop_ff:
+        return None
+    return {str(prop_key[off]): [prop_val[off]] for off in range(prop_ii, prop_ff)}
+
+
+def _read_to_arrow(
+        filename: str | pathlib.Path,
+        ) -> pyarrow.Array:
+    path = pathlib.Path(filename).expanduser().resolve()
+    ptr_array = ffi.new('struct ArrowArray[]', 1)
+    ptr_schema = ffi.new('struct ArrowSchema[]', 1)
+    if is_gzipped(path):
+        with gzip.open(path, mode='rb') as src:
+            data = src.read()
+        with tempfile.NamedTemporaryFile(suffix='.gds', delete=False) as tmp_stream:
+            tmp_stream.write(data)
+            tmp_name = tmp_stream.name
+        try:
+            _call_native(_get_clib().read_path(tmp_name.encode(), ptr_array, ptr_schema), 'read_path')
+        finally:
+            pathlib.Path(tmp_name).unlink(missing_ok=True)
+    else:
+        _call_native(_get_clib().read_path(str(path).encode(), ptr_array, ptr_schema), 'read_path')
+    return _import_arrow_array(ptr_array, ptr_schema)
+
+
+def _import_arrow_array(ptr_array: Any, ptr_schema: Any) -> pyarrow.Array:
+    iptr_schema = int(ffi.cast('uintptr_t', ptr_schema))
+    iptr_array = int(ffi.cast('uintptr_t', ptr_array))
+    return pyarrow.Array._import_from_c(iptr_array, iptr_schema)
+
+
+def _call_native(status: int, action: str) -> None:
+    if status == 0:
+        return
+
+    err_ptr = _get_clib().last_error_message()
+    if err_ptr == ffi.NULL:
+        raise KlamathError(f'{action} failed')
+
+    message = ffi.string(err_ptr).decode(errors='replace')
+    raise KlamathError(message)
+
+
+def _scan_buffer_to_arrow(buffer: bytes | mmap.mmap | memoryview) -> pyarrow.Array:
+    ptr_array = ffi.new('struct ArrowArray[]', 1)
+    ptr_schema = ffi.new('struct ArrowSchema[]', 1)
+    buf_view = memoryview(buffer)
+    cbuf = ffi.from_buffer('uint8_t[]', buf_view)
+    _call_native(_get_clib().scan_bytes(cbuf, len(buf_view), ptr_array, ptr_schema), 'scan_bytes')
+    return _import_arrow_array(ptr_array, ptr_schema)
+
+
+def _read_selected_cells_to_arrow(
+        buffer: bytes | mmap.mmap | memoryview,
+        ranges: NDArray[numpy.uint64],
+        ) -> pyarrow.Array:
+    ptr_array = ffi.new('struct ArrowArray[]', 1)
+    ptr_schema = ffi.new('struct ArrowSchema[]', 1)
+    buf_view = memoryview(buffer)
+    cbuf = ffi.from_buffer('uint8_t[]', buf_view)
+    flat_ranges = numpy.require(ranges, dtype=numpy.uint64, requirements=('C_CONTIGUOUS', 'ALIGNED'))
+    cranges = ffi.from_buffer('uint64_t[]', flat_ranges)
+    _call_native(
+        _get_clib().read_cells_bytes(cbuf, len(buf_view), cranges, int(flat_ranges.shape[0]), ptr_array, ptr_schema),
+        'read_cells_bytes',
+    )
+    return _import_arrow_array(ptr_array, ptr_schema)
+
+
+def readfile(
+        filename: str | pathlib.Path,
+        ) -> tuple[Library, dict[str, Any]]:
+    """
+    Read a GDSII file from a path into `masque.Library` / `Pattern` objects.
+
+    Will automatically decompress gzipped files.
+
+    Args:
+        filename: Filename to read.
+
+    For callers that can consume Arrow directly, prefer `readfile_arrow()`
+    to skip Python `Pattern` construction entirely.
+    """
+    arrow_arr = _read_to_arrow(filename)
+    assert len(arrow_arr) == 1
+
+    results = read_arrow(arrow_arr[0])
+
+    return results
+
+
+def readfile_arrow(
+        filename: str | pathlib.Path,
+        ) -> tuple[pyarrow.StructScalar, dict[str, Any]]:
+    """
+    Read a GDSII file into the native Arrow representation without converting
+    it into `masque.Library` / `Pattern` objects.
+
+    This is the lowest-overhead public read path exposed by this module.
+
+    Args:
+        filename: Filename to read.
+
+    Returns:
+        - Arrow struct scalar for the library payload
+        - dict of GDSII library info
+    """
+    arrow_arr = _read_to_arrow(filename)
+    assert len(arrow_arr) == 1
+    libarr = arrow_arr[0]
+    return libarr, _read_header(libarr)
+
+
+def read_arrow(
+        libarr: pyarrow.Array,
+        ) -> tuple[Library, dict[str, Any]]:
+    """
+    # TODO check GDSII file for cycles!
+    Read a gdsii file and translate it into a dict of Pattern objects. GDSII structures are
+     translated into Pattern objects; boundaries are translated into polygons, and srefs and arefs
+     are translated into Ref objects.
+
+    Additional library info is returned in a dict, containing:
+      'name': name of the library
+      'meters_per_unit': number of meters per database unit (all values are in database units)
+      'logical_units_per_unit': number of "logical" units displayed by layout tools (typically microns)
+                                per database unit
+
+    Args:
+        libarr: Arrow library payload as returned by `readfile_arrow()`.
+
+    Returns:
+        - dict of pattern_name:Patterns generated from GDSII structures
+        - dict of GDSII library info
+    """
+    library_info = _read_header(libarr)
+
+    layer_names_np = _packed_layer_u32_to_pairs(libarr['layers'].values.to_numpy())
+    layer_tups = [(int(pair[0]), int(pair[1])) for pair in layer_names_np]
+
+    cell_ids = libarr['cells'].values.field('id').to_numpy()
+    cell_names = libarr['cell_names'].as_py()
+
+    def get_geom(libarr: pyarrow.Array, geom_type: str) -> dict[str, Any]:
+        el = libarr['cells'].values.field(geom_type)
+        elem = dict(
+            offsets = el.offsets.to_numpy(),
+            xy_arr = el.values.field('xy').values.to_numpy().reshape((-1, 2)),
+            xy_off = el.values.field('xy').offsets.to_numpy() // 2,
+            layer_inds = el.values.field('layer').to_numpy(),
+            prop_off = el.values.field('properties').offsets.to_numpy(),
+            prop_key = el.values.field('properties').values.field('key').to_numpy(),
+            prop_val = el.values.field('properties').values.field('value').to_pylist(),
+            )
+        return elem
+
+    def get_boundary_batches(libarr: pyarrow.Array) -> dict[str, Any]:
+        batches = libarr['cells'].values.field('boundary_batches')
+        return dict(
+            offsets = batches.offsets.to_numpy(),
+            layer_inds = batches.values.field('layer').to_numpy(),
+            vert_arr = batches.values.field('vertices').values.to_numpy().reshape((-1, 2)),
+            vert_off = batches.values.field('vertices').offsets.to_numpy() // 2,
+            poly_off = batches.values.field('vertex_offsets').offsets.to_numpy(),
+            poly_offsets = batches.values.field('vertex_offsets').values.to_numpy(),
+            )
+
+    def get_rect_batches(libarr: pyarrow.Array) -> dict[str, Any]:
+        batches = libarr['cells'].values.field('rect_batches')
+        return dict(
+            offsets = batches.offsets.to_numpy(),
+            layer_inds = batches.values.field('layer').to_numpy(),
+            rect_arr = batches.values.field('rects').values.to_numpy().reshape((-1, 4)),
+            rect_off = batches.values.field('rects').offsets.to_numpy() // 4,
+            )
+
+    def get_boundary_props(libarr: pyarrow.Array) -> dict[str, Any]:
+        boundaries = libarr['cells'].values.field('boundary_props')
+        return dict(
+            offsets = boundaries.offsets.to_numpy(),
+            layer_inds = boundaries.values.field('layer').to_numpy(),
+            vert_arr = boundaries.values.field('vertices').values.to_numpy().reshape((-1, 2)),
+            vert_off = boundaries.values.field('vertices').offsets.to_numpy() // 2,
+            prop_off = boundaries.values.field('properties').offsets.to_numpy(),
+            prop_key = boundaries.values.field('properties').values.field('key').to_numpy(),
+            prop_val = boundaries.values.field('properties').values.field('value').to_pylist(),
+            )
+
+    def get_refs(libarr: pyarrow.Array, geom_type: str, has_repetition: bool) -> dict[str, Any]:
+        refs = libarr['cells'].values.field(geom_type)
+        values = refs.values
+        elem = dict(
+            offsets = refs.offsets.to_numpy(),
+            targets = values.field('target').to_numpy(),
+            xy = _packed_xy_u64_to_pairs(values.field('xy').to_numpy()),
+            invert_y = values.field('invert_y').to_numpy(zero_copy_only=False),
+            angle_rad = values.field('angle_rad').to_numpy(),
+            scale = values.field('scale').to_numpy(),
+            )
+        if has_repetition:
+            elem.update(dict(
+                xy0 = _packed_xy_u64_to_pairs(values.field('xy0').to_numpy()),
+                xy1 = _packed_xy_u64_to_pairs(values.field('xy1').to_numpy()),
+                counts = _packed_counts_u32_to_pairs(values.field('counts').to_numpy()),
+                ))
+        return elem
+
+    def get_ref_props(libarr: pyarrow.Array, geom_type: str, has_repetition: bool) -> dict[str, Any]:
+        refs = libarr['cells'].values.field(geom_type)
+        values = refs.values
+        elem = dict(
+            offsets = refs.offsets.to_numpy(),
+            targets = values.field('target').to_numpy(),
+            xy = _packed_xy_u64_to_pairs(values.field('xy').to_numpy()),
+            invert_y = values.field('invert_y').to_numpy(zero_copy_only=False),
+            angle_rad = values.field('angle_rad').to_numpy(),
+            scale = values.field('scale').to_numpy(),
+            prop_off = values.field('properties').offsets.to_numpy(),
+            prop_key = values.field('properties').values.field('key').to_numpy(),
+            prop_val = values.field('properties').values.field('value').to_pylist(),
+            )
+        if has_repetition:
+            elem.update(dict(
+                xy0 = _packed_xy_u64_to_pairs(values.field('xy0').to_numpy()),
+                xy1 = _packed_xy_u64_to_pairs(values.field('xy1').to_numpy()),
+                counts = _packed_counts_u32_to_pairs(values.field('counts').to_numpy()),
+                ))
+        return elem
+
+    txt = libarr['cells'].values.field('texts')
+    texts = dict(
+        offsets = txt.offsets.to_numpy(),
+        layer_inds = txt.values.field('layer').to_numpy(),
+        xy = _packed_xy_u64_to_pairs(txt.values.field('xy').to_numpy()),
+        string = txt.values.field('string').to_pylist(),
+        prop_off = txt.values.field('properties').offsets.to_numpy(),
+        prop_key = txt.values.field('properties').values.field('key').to_numpy(),
+        prop_val = txt.values.field('properties').values.field('value').to_pylist(),
+        )
+
+    elements = dict(
+        srefs = get_refs(libarr, 'srefs', has_repetition=False),
+        arefs = get_refs(libarr, 'arefs', has_repetition=True),
+        sref_props = get_ref_props(libarr, 'sref_props', has_repetition=False),
+        aref_props = get_ref_props(libarr, 'aref_props', has_repetition=True),
+        rect_batches = get_rect_batches(libarr),
+        boundary_batches = get_boundary_batches(libarr),
+        boundary_props = get_boundary_props(libarr),
+        paths = get_geom(libarr, 'paths'),
+        texts = texts,
+        )
+
+    paths = libarr['cells'].values.field('paths')
+    elements['paths'].update(dict(
+        width = paths.values.field('width').fill_null(0).to_numpy(),
+        path_type = paths.values.field('path_type').fill_null(0).to_numpy(),
+        extensions = numpy.stack((
+            paths.values.field('extension_start').fill_null(0).to_numpy(),
+            paths.values.field('extension_end').fill_null(0).to_numpy(),
+            ), axis=-1),
+        ))
+
+    global_args = dict(
+        cell_names = cell_names,
+        layer_tups = layer_tups,
+        )
+
+    mlib = Library()
+    for cc in range(len(libarr['cells'])):
+        name = cell_names[int(cell_ids[cc])]
+        pat = Pattern()
+        _rect_batches_to_rectcollections(pat, global_args, elements['rect_batches'], cc)
+        _boundary_batches_to_polygons(pat, global_args, elements['boundary_batches'], cc)
+        _boundary_props_to_polygons(pat, global_args, elements['boundary_props'], cc)
+        _gpaths_to_mpaths(pat, global_args, elements['paths'], cc)
+        _srefs_to_mrefs(pat, global_args, elements['srefs'], cc)
+        _arefs_to_mrefs(pat, global_args, elements['arefs'], cc)
+        _sref_props_to_mrefs(pat, global_args, elements['sref_props'], cc)
+        _aref_props_to_mrefs(pat, global_args, elements['aref_props'], cc)
+        _texts_to_labels(pat, global_args, elements['texts'], cc)
+        mlib[name] = pat
+
+    return mlib, library_info
+
+
+def _read_header(libarr: pyarrow.Array) -> dict[str, Any]:
+    """
+    Read the file header and create the library_info dict.
+    """
+    library_info = dict(
+        name = libarr['lib_name'].as_py(),
+        meters_per_unit = libarr['meters_per_db_unit'].as_py(),
+        logical_units_per_unit = libarr['user_units_per_db_unit'].as_py(),
+        )
+    return library_info
+
+
+def _srefs_to_mrefs(
+        pat: Pattern,
+        global_args: dict[str, Any],
+        elem: dict[str, Any],
+        cc: int,
+        ) -> None:
+    cell_names = global_args['cell_names']
+    elem_off = elem['offsets']
+    elem_count = elem_off[cc + 1] - elem_off[cc]
+    if elem_count == 0:
+        return
+
+    start = elem_off[cc]
+    stop = elem_off[cc + 1]
+    elem_targets = elem['targets'][start:stop]
+    elem_xy = elem['xy'][start:stop]
+    elem_invert_y = elem['invert_y'][start:stop]
+    elem_angle_rad = elem['angle_rad'][start:stop]
+    elem_scale = elem['scale'][start:stop]
+
+    _append_plain_refs_sorted(
+        pat=pat,
+        cell_names=cell_names,
+        elem_targets=elem_targets,
+        elem_xy=elem_xy,
+        elem_invert_y=elem_invert_y,
+        elem_angle_rad=elem_angle_rad,
+        elem_scale=elem_scale,
+        )
+
+
+def _append_plain_refs_sorted(
+        *,
+        pat: Pattern,
+        cell_names: list[str],
+        elem_targets: NDArray[numpy.integer[Any]],
+        elem_xy: NDArray[numpy.integer[Any]],
+        elem_invert_y: NDArray[numpy.bool_ | numpy.bool],
+        elem_angle_rad: NDArray[numpy.floating[Any]],
+        elem_scale: NDArray[numpy.floating[Any]],
+        ) -> None:
+    elem_count = len(elem_targets)
+    if elem_count == 0:
+        return
+
+    target_start = 0
+    while target_start < elem_count:
+        target_id = int(elem_targets[target_start])
+        target_stop = target_start + 1
+        while target_stop < elem_count and elem_targets[target_stop] == target_id:
+            target_stop += 1
+
+        append_refs = pat.refs[cell_names[target_id]].extend
+        append_refs(
+            Ref._from_raw(
+                offset=elem_xy[ee],
+                mirrored=elem_invert_y[ee],
+                rotation=elem_angle_rad[ee],
+                scale=elem_scale[ee],
+                repetition=None,
+                annotations=None,
+                )
+            for ee in range(target_start, target_stop)
+            )
+
+        target_start = target_stop
+
+
+def _arefs_to_mrefs(
+        pat: Pattern,
+        global_args: dict[str, Any],
+        elem: dict[str, Any],
+        cc: int,
+        ) -> None:
+    cell_names = global_args['cell_names']
+    elem_off = elem['offsets']
+    elem_count = elem_off[cc + 1] - elem_off[cc]
+    if elem_count == 0:
+        return
+
+    start = elem_off[cc]
+    stop = elem_off[cc + 1]
+    elem_targets = elem['targets'][start:stop]
+    elem_xy = elem['xy'][start:stop]
+    elem_invert_y = elem['invert_y'][start:stop]
+    elem_angle_rad = elem['angle_rad'][start:stop]
+    elem_scale = elem['scale'][start:stop]
+    elem_xy0 = elem['xy0'][start:stop]
+    elem_xy1 = elem['xy1'][start:stop]
+    elem_counts = elem['counts'][start:stop]
+
+    if len(elem_targets) == 0:
+        return
+
+    target = None
+    append_ref: Callable[[Ref], Any] | None = None
+    for ee in range(len(elem_targets)):
+        target_id = int(elem_targets[ee])
+        if target != target_id:
+            target = target_id
+            append_ref = pat.refs[cell_names[target_id]].append
+        assert append_ref is not None
+        a_count, b_count = elem_counts[ee]
+        append_ref(Ref._from_raw(
+            offset=elem_xy[ee],
+            mirrored=elem_invert_y[ee],
+            rotation=elem_angle_rad[ee],
+            scale=elem_scale[ee],
+            repetition=Grid._from_raw(a_vector=elem_xy0[ee], b_vector=elem_xy1[ee], a_count=a_count, b_count=b_count),
+            annotations=None,
+            ))
+
+
+def _sref_props_to_mrefs(
+        pat: Pattern,
+        global_args: dict[str, Any],
+        elem: dict[str, Any],
+        cc: int,
+        ) -> None:
+    cell_names = global_args['cell_names']
+    elem_off = elem['offsets']
+    prop_key = elem['prop_key']
+    prop_val = elem['prop_val']
+
+    elem_count = elem_off[cc + 1] - elem_off[cc]
+    if elem_count == 0:
+        return
+
+    elem_slc = slice(elem_off[cc], elem_off[cc] + elem_count + 1)
+    prop_offs = elem['prop_off'][elem_slc]
+    elem_targets = elem['targets'][elem_off[cc]:elem_off[cc + 1]]
+    elem_xy = elem['xy'][elem_off[cc]:elem_off[cc + 1]]
+    elem_invert_y = elem['invert_y'][elem_off[cc]:elem_off[cc + 1]]
+    elem_angle_rad = elem['angle_rad'][elem_off[cc]:elem_off[cc + 1]]
+    elem_scale = elem['scale'][elem_off[cc]:elem_off[cc + 1]]
+
+    for ee in range(elem_count):
+        annotations = _read_annotations(prop_offs, prop_key, prop_val, ee)
+        ref = Ref._from_raw(
+            offset=elem_xy[ee],
+            mirrored=elem_invert_y[ee],
+            rotation=elem_angle_rad[ee],
+            scale=elem_scale[ee],
+            repetition=None,
+            annotations=annotations,
+            )
+        pat.refs[cell_names[int(elem_targets[ee])]].append(ref)
+
+
+def _aref_props_to_mrefs(
+        pat: Pattern,
+        global_args: dict[str, Any],
+        elem: dict[str, Any],
+        cc: int,
+        ) -> None:
+    cell_names = global_args['cell_names']
+    elem_off = elem['offsets']
+    prop_key = elem['prop_key']
+    prop_val = elem['prop_val']
+
+    elem_count = elem_off[cc + 1] - elem_off[cc]
+    if elem_count == 0:
+        return
+
+    elem_slc = slice(elem_off[cc], elem_off[cc] + elem_count + 1)
+    prop_offs = elem['prop_off'][elem_slc]
+    elem_targets = elem['targets'][elem_off[cc]:elem_off[cc + 1]]
+    elem_xy = elem['xy'][elem_off[cc]:elem_off[cc + 1]]
+    elem_invert_y = elem['invert_y'][elem_off[cc]:elem_off[cc + 1]]
+    elem_angle_rad = elem['angle_rad'][elem_off[cc]:elem_off[cc + 1]]
+    elem_scale = elem['scale'][elem_off[cc]:elem_off[cc + 1]]
+    elem_xy0 = elem['xy0'][elem_off[cc]:elem_off[cc + 1]]
+    elem_xy1 = elem['xy1'][elem_off[cc]:elem_off[cc + 1]]
+    elem_counts = elem['counts'][elem_off[cc]:elem_off[cc + 1]]
+
+    for ee in range(elem_count):
+        a_count, b_count = elem_counts[ee]
+        annotations = _read_annotations(prop_offs, prop_key, prop_val, ee)
+        ref = Ref._from_raw(
+            offset=elem_xy[ee],
+            mirrored=elem_invert_y[ee],
+            rotation=elem_angle_rad[ee],
+            scale=elem_scale[ee],
+            repetition=Grid._from_raw(a_vector=elem_xy0[ee], b_vector=elem_xy1[ee], a_count=a_count, b_count=b_count),
+            annotations=annotations,
+            )
+        pat.refs[cell_names[int(elem_targets[ee])]].append(ref)
+
+
+def _texts_to_labels(
+        pat: Pattern,
+        global_args: dict[str, Any],
+        elem: dict[str, Any],
+        cc: int,
+        ) -> None:
+    elem_off = elem['offsets']      # which elements belong to each cell
+    xy = elem['xy']
+    layer_tups = global_args['layer_tups']
+    layer_inds = elem['layer_inds']
+    prop_key = elem['prop_key']
+    prop_val = elem['prop_val']
+
+    elem_count = elem_off[cc + 1] - elem_off[cc]
+    elem_slc = slice(elem_off[cc], elem_off[cc] + elem_count + 1)   # +1 to capture ending location for last elem
+    prop_offs = elem['prop_off'][elem_slc]  # which props belong to each element
+    elem_xy = xy[elem_slc][:elem_count]
+    elem_layer_inds = layer_inds[elem_slc][:elem_count]
+    elem_strings = elem['string'][elem_slc][:elem_count]
+
+    for ee in range(elem_count):
+        layer = layer_tups[int(elem_layer_inds[ee])]
+        offset = elem_xy[ee]
+        string = elem_strings[ee]
+
+        annotations = _read_annotations(prop_offs, prop_key, prop_val, ee)
+        mlabel = Label._from_raw(string=string, offset=offset, annotations=annotations)
+        pat.labels[layer].append(mlabel)
+
+
+def _gpaths_to_mpaths(
+        pat: Pattern,
+        global_args: dict[str, Any],
+        elem: dict[str, Any],
+        cc: int,
+        ) -> None:
+    elem_off = elem['offsets']      # which elements belong to each cell
+    xy_val = elem['xy_arr']
+    layer_tups = global_args['layer_tups']
+    layer_inds = elem['layer_inds']
+    prop_key = elem['prop_key']
+    prop_val = elem['prop_val']
+
+    elem_count = elem_off[cc + 1] - elem_off[cc]
+    elem_slc = slice(elem_off[cc], elem_off[cc] + elem_count + 1)   # +1 to capture ending location for last elem
+    xy_offs = elem['xy_off'][elem_slc]      # which xy coords belong to each element
+    prop_offs = elem['prop_off'][elem_slc]  # which props belong to each element
+    elem_layer_inds = layer_inds[elem_slc][:elem_count]
+    elem_widths = elem['width'][elem_slc][:elem_count]
+    elem_path_types = elem['path_type'][elem_slc][:elem_count]
+    elem_extensions = elem['extensions'][elem_slc][:elem_count]
+
+    for ee in range(elem_count):
+        layer = layer_tups[int(elem_layer_inds[ee])]
+        vertices = xy_val[xy_offs[ee]:xy_offs[ee + 1]]
+        width = elem_widths[ee]
+        cap_int = int(elem_path_types[ee])
+        if cap_int not in path_cap_map:
+            raise PatternError(f'Unrecognized path type: {cap_int}')
+        cap = path_cap_map[cap_int]
+        if cap_int == 4:
+            cap_extensions = elem_extensions[ee]
+        else:
+            cap_extensions = None
+
+        annotations = _read_annotations(prop_offs, prop_key, prop_val, ee)
+        path = Path._from_raw(
+            vertices=vertices,
+            width=width,
+            cap=cap,
+            cap_extensions=cap_extensions,
+            annotations=annotations,
+            )
+        pat.shapes[layer].append(path)
+
+
+def _boundary_batches_to_polygons(
+        pat: Pattern,
+        global_args: dict[str, Any],
+        elem: dict[str, Any],
+        cc: int,
+        ) -> None:
+    elem_off = elem['offsets']      # which elements belong to each cell
+    vert_arr = elem['vert_arr']
+    vert_off = elem['vert_off']
+    layer_inds = elem['layer_inds']
+    layer_tups = global_args['layer_tups']
+    poly_off = elem['poly_off']
+    poly_offsets = elem['poly_offsets']
+
+    batch_count = elem_off[cc + 1] - elem_off[cc]
+    if batch_count == 0:
+        return
+
+    elem_slc = slice(elem_off[cc], elem_off[cc] + batch_count + 1)   # +1 to capture ending location for last elem
+    elem_vert_off = vert_off[elem_slc]
+    elem_poly_off = poly_off[elem_slc]
+    elem_layer_inds = layer_inds[elem_slc][:batch_count]
+
+    for bb in range(batch_count):
+        layer = layer_tups[int(elem_layer_inds[bb])]
+        vertices = vert_arr[elem_vert_off[bb]:elem_vert_off[bb + 1]]
+        vertex_offsets = poly_offsets[elem_poly_off[bb]:elem_poly_off[bb + 1]]
+
+        if vertex_offsets.size == 1:
+            poly = Polygon._from_raw(vertices=vertices, annotations=None)
+            pat.shapes[layer].append(poly)
+        else:
+            polys = PolyCollection._from_raw(vertex_lists=vertices, vertex_offsets=vertex_offsets, annotations=None)
+            pat.shapes[layer].append(polys)
+
+
+def _rect_batches_to_rectcollections(
+        pat: Pattern,
+        global_args: dict[str, Any],
+        elem: dict[str, Any],
+        cc: int,
+        ) -> None:
+    elem_off = elem['offsets']
+    rect_arr = elem['rect_arr']
+    rect_off = elem['rect_off']
+    layer_inds = elem['layer_inds']
+    layer_tups = global_args['layer_tups']
+
+    batch_count = elem_off[cc + 1] - elem_off[cc]
+    if batch_count == 0:
+        return
+
+    elem_slc = slice(elem_off[cc], elem_off[cc] + batch_count + 1)
+    elem_rect_off = rect_off[elem_slc]
+    elem_layer_inds = layer_inds[elem_slc][:batch_count]
+
+    for bb in range(batch_count):
+        layer = layer_tups[int(elem_layer_inds[bb])]
+        rects = rect_arr[elem_rect_off[bb]:elem_rect_off[bb + 1]]
+        rect_collection = RectCollection._from_raw(rects=rects, annotations=None)
+        pat.shapes[layer].append(rect_collection)
+
+
+def _boundary_props_to_polygons(
+        pat: Pattern,
+        global_args: dict[str, Any],
+        elem: dict[str, Any],
+        cc: int,
+        ) -> None:
+    elem_off = elem['offsets']
+    vert_arr = elem['vert_arr']
+    vert_off = elem['vert_off']
+    layer_inds = elem['layer_inds']
+    layer_tups = global_args['layer_tups']
+    prop_key = elem['prop_key']
+    prop_val = elem['prop_val']
+
+    elem_count = elem_off[cc + 1] - elem_off[cc]
+    if elem_count == 0:
+        return
+
+    elem_slc = slice(elem_off[cc], elem_off[cc] + elem_count + 1)
+    elem_vert_off = vert_off[elem_slc]
+    prop_offs = elem['prop_off'][elem_slc]
+    elem_layer_inds = layer_inds[elem_slc][:elem_count]
+
+    for ee in range(elem_count):
+        layer = layer_tups[int(elem_layer_inds[ee])]
+        vertices = vert_arr[elem_vert_off[ee]:elem_vert_off[ee + 1]]
+        annotations = _read_annotations(prop_offs, prop_key, prop_val, ee)
+        poly = Polygon._from_raw(vertices=vertices, annotations=annotations)
+        pat.shapes[layer].append(poly)
+
+
+#def _properties_to_annotations(properties: pyarrow.Array) -> annotations_t:
+#    return {prop['key'].as_py(): prop['value'].as_py() for prop in properties}
+
+
+def check_valid_names(
+        names: Iterable[str],
+        max_length: int = 32,
+        ) -> None:
+    """
+    Check all provided names to see if they're valid GDSII cell names.
+
+    Args:
+        names: Collection of names to check
+        max_length: Max allowed length
+
+    """
+    allowed_chars = set(string.ascii_letters + string.digits + '_?$')
+
+    bad_chars = [
+        name for name in names
+        if not set(name).issubset(allowed_chars)
+        ]
+
+    bad_lengths = [
+        name for name in names
+        if len(name) > max_length
+        ]
+
+    if bad_chars:
+        logger.error('Names contain invalid characters:\n' + pformat(bad_chars))
+
+    if bad_lengths:
+        logger.error(f'Names too long (>{max_length}:\n' + pformat(bad_chars))
+
+    if bad_chars or bad_lengths:
+        raise LibraryError('Library contains invalid names, see log above')

masque/file/gdsii_lazy.py

@@ -0,0 +1,388 @@
+"""
+Classic source-backed lazy GDSII reader built on the pure-python klamath path.
+
+This module provides the non-Arrow half of Masque's lazy GDS architecture:
+
+- `GdsLibrarySource` scans a GDS stream once to discover library metadata,
+  struct order, and child edges without materializing every cell.
+- cells are materialized on demand through the classic `gdsii` decoder
+  whenever a caller indexes the lazy view
+- the source can be wrapped in `PortsLibraryView` or merged through
+  `OverlayLibrary`, both of which live in `gdsii_lazy_core`
+
+The public surface intentionally parallels `gdsii_lazy_arrow` closely so that
+callers can swap between the classic and Arrow-backed implementations with
+minimal changes.
+"""
+from __future__ import annotations
+
+from dataclasses import dataclass
+from typing import IO, Any, cast
+from collections import defaultdict
+from collections.abc import Iterator, Sequence
+import gzip
+import io
+import logging
+import mmap
+import pathlib
+
+import klamath
+import numpy
+from numpy.typing import NDArray
+from klamath import records
+
+from . import gdsii
+from .utils import is_gzipped
+from .gdsii_lazy_core import OverlayLibrary, PortsLibraryView, _pattern_children, write, writefile
+from ..error import LibraryError
+from ..library import ILibraryView, LibraryView, dangling_mode_t
+from ..pattern import Pattern
+from ..utils import apply_transforms
+
+
+logger = logging.getLogger(__name__)
+
+
+@dataclass
+class _SourceHandle:
+    """ Owns the underlying stream and any companion file handle for a source. """
+    path: pathlib.Path | None
+    stream: IO[bytes]
+    handle: IO[bytes] | None = None
+
+    def close(self) -> None:
+        self.stream.close()
+        if self.handle is not None and self.handle is not self.stream:
+            self.handle.close()
+            self.handle = None
+
+
+@dataclass(frozen=True)
+class _CellScan:
+    """ Scan-time metadata for one cell in the source stream. """
+    offset: int
+    children: set[str]
+
+
+def _open_source_stream(
+        filename: str | pathlib.Path,
+        *,
+        use_mmap: bool,
+        ) -> _SourceHandle:
+    path = pathlib.Path(filename).expanduser().resolve()
+    if is_gzipped(path):
+        if use_mmap:
+            logger.info('Asked to mmap a gzipped file, reading into memory instead...')
+            with gzip.open(path, mode='rb') as stream:
+                data = stream.read()
+            return _SourceHandle(path=path, stream=io.BytesIO(data))
+        stream = cast('IO[bytes]', gzip.open(path, mode='rb'))
+        return _SourceHandle(path=path, stream=stream)
+
+    if use_mmap:
+        handle = path.open(mode='rb', buffering=0)
+        mapped = cast('IO[bytes]', mmap.mmap(handle.fileno(), 0, access=mmap.ACCESS_READ))
+        return _SourceHandle(path=path, stream=mapped, handle=handle)
+
+    stream = path.open(mode='rb')
+    return _SourceHandle(path=path, stream=stream)
+
+
+def _scan_library(
+        stream: IO[bytes],
+        ) -> tuple[dict[str, Any], list[str], dict[str, _CellScan]]:
+    library_info = gdsii._read_header(stream)
+    order: list[str] = []
+    cells: dict[str, _CellScan] = {}
+
+    found_struct = records.BGNSTR.skip_past(stream)
+    while found_struct:
+        name = records.STRNAME.skip_and_read(stream).decode('ASCII')
+        offset = stream.tell()
+        elements = klamath.library.read_elements(stream)
+        children = {
+            element.struct_name.decode('ASCII')
+            for element in elements
+            if isinstance(element, klamath.elements.Reference)
+        }
+        order.append(name)
+        cells[name] = _CellScan(offset=offset, children=children)
+        found_struct = records.BGNSTR.skip_past(stream)
+
+    return library_info, order, cells
+
+
+class GdsLibrarySource(ILibraryView):
+    """
+    Read-only library backed by a seekable GDS stream.
+
+    Cells are scanned once up front to discover order and child edges, then
+    materialized one at a time through the classic `gdsii.read_elements` path.
+
+    The source owns the stream lifetime, preserves on-disk ordering through
+    `source_order()`, and answers graph queries from scan metadata whenever
+    possible so callers can inspect hierarchy without forcing a full load.
+    """
+
+    def __init__(
+            self,
+            *,
+            source: _SourceHandle,
+            library_info: dict[str, Any],
+            cell_order: Sequence[str],
+            cells: dict[str, _CellScan],
+            ) -> None:
+        self.path = source.path
+        self.library_info = library_info
+        self._source = source
+        self._cell_order = tuple(cell_order)
+        self._cells = cells
+        self._cache: dict[str, Pattern] = {}
+        self._lookups_in_progress: list[str] = []
+
+    @classmethod
+    def from_file(
+            cls,
+            filename: str | pathlib.Path,
+            *,
+            use_mmap: bool = True,
+            ) -> GdsLibrarySource:
+        source = _open_source_stream(filename, use_mmap=use_mmap)
+        source.stream.seek(0)
+        library_info, cell_order, cells = _scan_library(source.stream)
+        return cls(source=source, library_info=library_info, cell_order=cell_order, cells=cells)
+
+    def __getitem__(self, key: str) -> Pattern:
+        return self._materialize_pattern(key, persist=True)
+
+    def __iter__(self) -> Iterator[str]:
+        return iter(self._cell_order)
+
+    def __len__(self) -> int:
+        return len(self._cell_order)
+
+    def __contains__(self, key: object) -> bool:
+        return key in self._cells
+
+    def source_order(self) -> tuple[str, ...]:
+        return self._cell_order
+
+    def materialize_many(
+            self,
+            names: Sequence[str],
+            *,
+            persist: bool = True,
+            ) -> LibraryView:
+        mats = {
+            name: self._materialize_pattern(name, persist=persist)
+            for name in dict.fromkeys(names)
+        }
+        return LibraryView(mats)
+
+    def _materialize_pattern(self, name: str, *, persist: bool) -> Pattern:
+        if name in self._cache:
+            return self._cache[name]
+
+        if name not in self._cells:
+            raise KeyError(name)
+
+        if name in self._lookups_in_progress:
+            chain = ' -> '.join(self._lookups_in_progress + [name])
+            raise LibraryError(
+                f'Detected circular reference or recursive lookup of "{name}".\n'
+                f'Lookup chain: {chain}\n'
+                'This may be caused by an invalid (cyclical) reference, or buggy code.\n'
+                'If you are lazy-loading a file, try a non-lazy load and check for reference cycles.'
+                )
+
+        self._lookups_in_progress.append(name)
+        try:
+            self._source.stream.seek(self._cells[name].offset)
+            pat = gdsii.read_elements(self._source.stream, raw_mode=True)
+        finally:
+            self._lookups_in_progress.pop()
+
+        if persist:
+            self._cache[name] = pat
+        return pat
+
+    def _raw_children(self, name: str) -> set[str]:
+        return set(self._cells[name].children)
+
+    def child_graph(
+            self,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[str, set[str]]:
+        graph: dict[str, set[str]] = {}
+        for name in self._cell_order:
+            if name in self._cache:
+                graph[name] = _pattern_children(self._cache[name])
+            else:
+                graph[name] = self._raw_children(name)
+
+        existing = set(graph)
+        dangling_refs = set().union(*(children - existing for children in graph.values()))
+        if dangling == 'error':
+            if dangling_refs:
+                raise self._dangling_refs_error(cast('set[str]', dangling_refs), 'building child graph')
+            return graph
+        if dangling == 'ignore':
+            return {name: {child for child in children if child in existing} for name, children in graph.items()}
+
+        for child in dangling_refs:
+            graph.setdefault(cast('str', child), set())
+        return graph
+
+    def parent_graph(
+            self,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[str, set[str]]:
+        child_graph = self.child_graph(dangling='include' if dangling == 'include' else 'ignore')
+        existing = set(self.keys())
+        igraph: dict[str, set[str]] = {name: set() for name in child_graph}
+        for parent, children in child_graph.items():
+            for child in children:
+                if child in existing or dangling == 'include':
+                    igraph.setdefault(child, set()).add(parent)
+        if dangling == 'error':
+            raw = self.child_graph(dangling='include')
+            dangling_refs = set().union(*(children - existing for children in raw.values()))
+            if dangling_refs:
+                raise self._dangling_refs_error(cast('set[str]', dangling_refs), 'building parent graph')
+        return igraph
+
+    def subtree(
+            self,
+            tops: str | Sequence[str],
+            ) -> ILibraryView:
+        if isinstance(tops, str):
+            tops = (tops,)
+        keep = cast('set[str]', self.referenced_patterns(tops) - {None})
+        keep |= set(tops)
+        return self.materialize_many(tuple(keep), persist=True)
+
+    def tops(self) -> list[str]:
+        graph = self.child_graph(dangling='ignore')
+        names = set(graph)
+        not_toplevel: set[str] = set()
+        for children in graph.values():
+            not_toplevel |= children
+        return list(names - not_toplevel)
+
+    def with_ports_from_data(
+            self,
+            *,
+            layers: Sequence[tuple[int, int] | int],
+            max_depth: int = 0,
+            skip_subcells: bool = True,
+            ) -> PortsLibraryView:
+        return PortsLibraryView(
+            self,
+            layers=layers,
+            max_depth=max_depth,
+            skip_subcells=skip_subcells,
+        )
+
+    def find_refs_local(
+            self,
+            name: str,
+            parent_graph: dict[str, set[str]] | None = None,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[str, list[NDArray[numpy.float64]]]:
+        instances: dict[str, list[NDArray[numpy.float64]]] = defaultdict(list)
+        if parent_graph is None:
+            graph_mode = 'ignore' if dangling == 'ignore' else 'include'
+            parent_graph = self.parent_graph(dangling=graph_mode)
+
+        if name not in self:
+            if name not in parent_graph:
+                return instances
+            if dangling == 'error':
+                raise self._dangling_refs_error({name}, f'finding local refs for {name!r}')
+            if dangling == 'ignore':
+                return instances
+
+        for parent in parent_graph.get(name, set()):
+            if parent in self._cache:
+                for ref in self._cache[parent].refs.get(name, []):
+                    instances[parent].append(ref.as_transforms())
+                continue
+            pat = self._materialize_pattern(parent, persist=False)
+            for ref in pat.refs.get(name, []):
+                instances[parent].append(ref.as_transforms())
+        return instances
+
+    def find_refs_global(
+            self,
+            name: str,
+            order: list[str] | None = None,
+            parent_graph: dict[str, set[str]] | None = None,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[tuple[str, ...], NDArray[numpy.float64]]:
+        graph_mode = 'ignore' if dangling == 'ignore' else 'include'
+        if order is None:
+            order = self.child_order(dangling=graph_mode)
+        if parent_graph is None:
+            parent_graph = self.parent_graph(dangling=graph_mode)
+
+        if name not in self:
+            if name not in parent_graph:
+                return {}
+            if dangling == 'error':
+                raise self._dangling_refs_error({name}, f'finding global refs for {name!r}')
+            if dangling == 'ignore':
+                return {}
+
+        self_keys = set(self.keys())
+        transforms: dict[str, list[tuple[tuple[str, ...], NDArray[numpy.float64]]]]
+        transforms = defaultdict(list)
+        for parent, vals in self.find_refs_local(name, parent_graph=parent_graph, dangling=dangling).items():
+            transforms[parent] = [((name,), numpy.concatenate(vals))]
+
+        for next_name in order:
+            if next_name not in transforms:
+                continue
+            if not parent_graph.get(next_name, set()) & self_keys:
+                continue
+
+            outers = self.find_refs_local(next_name, parent_graph=parent_graph, dangling=dangling)
+            inners = transforms.pop(next_name)
+            for parent, outer in outers.items():
+                outer_tf = numpy.concatenate(outer)
+                for path, inner in inners:
+                    combined = apply_transforms(outer_tf, inner)
+                    transforms[parent].append(((next_name,) + path, combined))
+
+        result = {}
+        for parent, targets in transforms.items():
+            for path, instances in targets:
+                result[(parent,) + path] = instances
+        return result
+
+    def close(self) -> None:
+        self._source.close()
+
+    def __enter__(self) -> GdsLibrarySource:
+        return self
+
+    def __exit__(self, *_args: object) -> None:
+        self.close()
+
+
+def read(
+        stream: IO[bytes],
+        ) -> tuple[GdsLibrarySource, dict[str, Any]]:
+    source = _SourceHandle(path=None, stream=stream)
+    stream.seek(0)
+    library_info, cell_order, cells = _scan_library(stream)
+    lib = GdsLibrarySource(source=source, library_info=library_info, cell_order=cell_order, cells=cells)
+    return lib, library_info
+
+
+def readfile(
+        filename: str | pathlib.Path,
+        *,
+        use_mmap: bool = True,
+        ) -> tuple[GdsLibrarySource, dict[str, Any]]:
+    lib = GdsLibrarySource.from_file(filename, use_mmap=use_mmap)
+    return lib, lib.library_info

masque/file/gdsii_lazy_arrow.py

@@ -0,0 +1,519 @@
+"""
+Lazy GDSII readers and writers backed by native Arrow scan/materialize paths.
+
+This module is intentionally separate from `gdsii_arrow` so the eager read path
+keeps its current behavior and performance profile.
+"""
+from __future__ import annotations
+
+from dataclasses import dataclass
+from typing import IO, Any, cast
+from collections import defaultdict
+from collections.abc import Iterator, Sequence
+import gzip
+import logging
+import mmap
+import pathlib
+
+import numpy
+from numpy.typing import NDArray
+import pyarrow
+
+from . import gdsii_arrow
+from .utils import is_gzipped
+from .gdsii_lazy_core import OverlayLibrary, PortsLibraryView, _pattern_children, write, writefile
+from ..library import ILibraryView, LibraryView, dangling_mode_t
+from ..pattern import Pattern
+from ..utils import apply_transforms
+
+
+logger = logging.getLogger(__name__)
+
+
+@dataclass(frozen=True)
+class _StructRange:
+    start: int
+    end: int
+
+
+@dataclass
+class _SourceBuffer:
+    path: pathlib.Path
+    data: bytes | mmap.mmap
+    handle: IO[bytes] | None = None
+
+    def raw_slice(self, start: int, end: int) -> bytes:
+        return self.data[start:end]
+
+
+@dataclass
+class _ScanRefs:
+    offsets: NDArray[numpy.integer[Any]]
+    targets: NDArray[numpy.integer[Any]]
+    xy: NDArray[numpy.int32]
+    xy0: NDArray[numpy.int32]
+    xy1: NDArray[numpy.int32]
+    counts: NDArray[numpy.int64]
+    invert_y: NDArray[numpy.bool_ | numpy.bool]
+    angle_rad: NDArray[numpy.floating[Any]]
+    scale: NDArray[numpy.floating[Any]]
+
+
+@dataclass(frozen=True)
+class _CellScan:
+    cell_id: int
+    struct_range: _StructRange
+    ref_start: int
+    ref_stop: int
+    children: set[str]
+
+
+@dataclass
+class _ScanPayload:
+    libarr: pyarrow.StructScalar
+    library_info: dict[str, Any]
+    cell_names: list[str]
+    cell_order: list[str]
+    cells: dict[str, _CellScan]
+    refs: _ScanRefs
+
+def is_available() -> bool:
+    return gdsii_arrow.is_available()
+
+
+def _read_header(libarr: pyarrow.StructScalar) -> dict[str, Any]:
+    return gdsii_arrow._read_header(libarr)
+
+
+def _open_source_buffer(path: pathlib.Path) -> _SourceBuffer:
+    if is_gzipped(path):
+        with gzip.open(path, mode='rb') as stream:
+            data = stream.read()
+        return _SourceBuffer(path=path, data=data)
+
+    handle = path.open(mode='rb', buffering=0)
+    mapped = mmap.mmap(handle.fileno(), 0, access=mmap.ACCESS_READ)
+    return _SourceBuffer(path=path, data=mapped, handle=handle)
+
+
+def _extract_scan_payload(libarr: pyarrow.StructScalar) -> _ScanPayload:
+    library_info = _read_header(libarr)
+    cell_names = libarr['cell_names'].as_py()
+
+    cells = libarr['cells']
+    cell_values = cells.values
+    cell_ids = cell_values.field('id').to_numpy()
+    struct_starts = cell_values.field('struct_start_offset').to_numpy()
+    struct_ends = cell_values.field('struct_end_offset').to_numpy()
+
+    refs = cell_values.field('refs')
+    ref_values = refs.values
+    ref_offsets = refs.offsets.to_numpy()
+    targets = ref_values.field('target').to_numpy()
+    xy = gdsii_arrow._packed_xy_u64_to_pairs(ref_values.field('xy').to_numpy())
+    xy0 = gdsii_arrow._packed_xy_u64_to_pairs(ref_values.field('xy0').to_numpy())
+    xy1 = gdsii_arrow._packed_xy_u64_to_pairs(ref_values.field('xy1').to_numpy())
+    counts = gdsii_arrow._packed_counts_u32_to_pairs(ref_values.field('counts').to_numpy())
+    invert_y = ref_values.field('invert_y').to_numpy(zero_copy_only=False)
+    angle_rad = ref_values.field('angle_rad').to_numpy()
+    scale = ref_values.field('scale').to_numpy()
+
+    ref_payload = _ScanRefs(
+        offsets=ref_offsets,
+        targets=targets,
+        xy=xy,
+        xy0=xy0,
+        xy1=xy1,
+        counts=counts,
+        invert_y=invert_y,
+        angle_rad=angle_rad,
+        scale=scale,
+    )
+
+    cell_order = [cell_names[int(cell_id)] for cell_id in cell_ids]
+    cell_scan: dict[str, _CellScan] = {}
+    for cc, name in enumerate(cell_order):
+        ref_start = int(ref_offsets[cc])
+        ref_stop = int(ref_offsets[cc + 1])
+        children = {
+            cell_names[int(target)]
+            for target in targets[ref_start:ref_stop]
+        }
+        cell_scan[name] = _CellScan(
+            cell_id=int(cell_ids[cc]),
+            struct_range=_StructRange(int(struct_starts[cc]), int(struct_ends[cc])),
+            ref_start=ref_start,
+            ref_stop=ref_stop,
+            children=children,
+        )
+
+    return _ScanPayload(
+        libarr=libarr,
+        library_info=library_info,
+        cell_names=cell_names,
+        cell_order=cell_order,
+        cells=cell_scan,
+        refs=ref_payload,
+    )
+
+def _make_ref_rows(
+        xy: NDArray[numpy.integer[Any]],
+        angle_rad: NDArray[numpy.floating[Any]],
+        invert_y: NDArray[numpy.bool_ | numpy.bool],
+        scale: NDArray[numpy.floating[Any]],
+        ) -> NDArray[numpy.float64]:
+    rows = numpy.empty((len(xy), 5), dtype=float)
+    rows[:, :2] = xy
+    rows[:, 2] = angle_rad
+    rows[:, 3] = invert_y.astype(float)
+    rows[:, 4] = scale
+    return rows
+
+
+def _expand_aref_row(
+        xy: NDArray[numpy.integer[Any]],
+        xy0: NDArray[numpy.integer[Any]],
+        xy1: NDArray[numpy.integer[Any]],
+        counts: NDArray[numpy.integer[Any]],
+        angle_rad: float,
+        invert_y: bool,
+        scale: float,
+        ) -> NDArray[numpy.float64]:
+    a_count = int(counts[0])
+    b_count = int(counts[1])
+    aa, bb = numpy.meshgrid(numpy.arange(a_count), numpy.arange(b_count), indexing='ij')
+    displacements = aa.reshape(-1, 1) * xy0[None, :] + bb.reshape(-1, 1) * xy1[None, :]
+    rows = numpy.empty((displacements.shape[0], 5), dtype=float)
+    rows[:, :2] = xy + displacements
+    rows[:, 2] = angle_rad
+    rows[:, 3] = float(invert_y)
+    rows[:, 4] = scale
+    return rows
+
+
+class ArrowLibrary(ILibraryView):
+    """
+    Read-only library backed by the native lazy Arrow scan schema.
+
+    Materializing a cell via `__getitem__` caches a real `Pattern` for that cell.
+    Cached cells are treated as edited for future writes from this module.
+    """
+
+    path: pathlib.Path
+    library_info: dict[str, Any]
+
+    def __init__(
+            self,
+            *,
+            path: pathlib.Path,
+            payload: _ScanPayload,
+            source: _SourceBuffer,
+            ) -> None:
+        self.path = path
+        self.library_info = payload.library_info
+        self._payload = payload
+        self._source = source
+        self._cache: dict[str, Pattern] = {}
+
+    @classmethod
+    def from_file(cls, filename: str | pathlib.Path) -> ArrowLibrary:
+        path = pathlib.Path(filename).expanduser().resolve()
+        source = _open_source_buffer(path)
+        scan_arr = gdsii_arrow._scan_buffer_to_arrow(source.data)
+        assert len(scan_arr) == 1
+        payload = _extract_scan_payload(scan_arr[0])
+        return cls(path=path, payload=payload, source=source)
+
+    def __getitem__(self, key: str) -> Pattern:
+        return self._materialize_pattern(key, persist=True)
+
+    def __iter__(self) -> Iterator[str]:
+        return iter(self._payload.cell_order)
+
+    def __len__(self) -> int:
+        return len(self._payload.cell_order)
+
+    def __contains__(self, key: object) -> bool:
+        return key in self._payload.cells
+
+    def source_order(self) -> tuple[str, ...]:
+        return tuple(self._payload.cell_order)
+
+    def raw_struct_bytes(self, name: str) -> bytes:
+        struct_range = self._payload.cells[name].struct_range
+        return self._source.raw_slice(struct_range.start, struct_range.end)
+
+    def can_copy_raw_struct(self, name: str) -> bool:
+        return name not in self._cache
+
+    def materialize_many(
+            self,
+            names: Sequence[str],
+            *,
+            persist: bool = True,
+            ) -> LibraryView:
+        mats = self._materialize_patterns(names, persist=persist)
+        return LibraryView(mats)
+
+    def _materialize_patterns(
+            self,
+            names: Sequence[str],
+            *,
+            persist: bool,
+            ) -> dict[str, Pattern]:
+        ordered_names = list(dict.fromkeys(names))
+        missing = [name for name in ordered_names if name not in self._payload.cells]
+        if missing:
+            raise KeyError(missing[0])
+
+        materialized: dict[str, Pattern] = {}
+        uncached = [name for name in ordered_names if name not in self._cache]
+        if uncached:
+            ranges = numpy.asarray(
+                [
+                    [
+                        self._payload.cells[name].struct_range.start,
+                        self._payload.cells[name].struct_range.end,
+                    ]
+                    for name in uncached
+                ],
+                dtype=numpy.uint64,
+            )
+            arrow_arr = gdsii_arrow._read_selected_cells_to_arrow(self._source.data, ranges)
+            assert len(arrow_arr) == 1
+            selected_lib, _info = gdsii_arrow.read_arrow(arrow_arr[0])
+            for name in uncached:
+                pat = selected_lib[name]
+                materialized[name] = pat
+                if persist:
+                    self._cache[name] = pat
+
+        for name in ordered_names:
+            if name in self._cache:
+                materialized[name] = self._cache[name]
+        return materialized
+
+    def _materialize_pattern(self, name: str, *, persist: bool) -> Pattern:
+        return self._materialize_patterns((name,), persist=persist)[name]
+
+    def _raw_children(self, name: str) -> set[str]:
+        return set(self._payload.cells[name].children)
+
+    def _collect_raw_transforms(self, cell: _CellScan, target_id: int) -> list[NDArray[numpy.float64]]:
+        refs = self._payload.refs
+        start = cell.ref_start
+        stop = cell.ref_stop
+        if stop <= start:
+            return []
+
+        targets = refs.targets[start:stop]
+        mask = targets == target_id
+        if not mask.any():
+            return []
+
+        rows: list[NDArray[numpy.float64]] = []
+        counts = refs.counts[start:stop]
+        unit_mask = mask & (counts[:, 0] == 1) & (counts[:, 1] == 1)
+        if unit_mask.any():
+            rows.append(_make_ref_rows(
+                refs.xy[start:stop][unit_mask],
+                refs.angle_rad[start:stop][unit_mask],
+                refs.invert_y[start:stop][unit_mask],
+                refs.scale[start:stop][unit_mask],
+            ))
+
+        aref_indices = numpy.nonzero(mask & ~unit_mask)[0]
+        for idx in aref_indices:
+            abs_idx = start + int(idx)
+            rows.append(_expand_aref_row(
+                xy=refs.xy[abs_idx],
+                xy0=refs.xy0[abs_idx],
+                xy1=refs.xy1[abs_idx],
+                counts=refs.counts[abs_idx],
+                angle_rad=float(refs.angle_rad[abs_idx]),
+                invert_y=bool(refs.invert_y[abs_idx]),
+                scale=float(refs.scale[abs_idx]),
+            ))
+        return rows
+
+    def child_graph(
+            self,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[str, set[str]]:
+        graph: dict[str, set[str]] = {}
+        for name in self._payload.cell_order:
+            if name in self._cache:
+                graph[name] = _pattern_children(self._cache[name])
+            else:
+                graph[name] = self._raw_children(name)
+
+        existing = set(graph)
+        dangling_refs = set().union(*(children - existing for children in graph.values()))
+        if dangling == 'error':
+            if dangling_refs:
+                raise self._dangling_refs_error(cast('set[str]', dangling_refs), 'building child graph')
+            return graph
+        if dangling == 'ignore':
+            return {name: {child for child in children if child in existing} for name, children in graph.items()}
+
+        for child in dangling_refs:
+            graph.setdefault(cast('str', child), set())
+        return graph
+
+    def parent_graph(
+            self,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[str, set[str]]:
+        child_graph = self.child_graph(dangling='include' if dangling == 'include' else 'ignore')
+        existing = set(self.keys())
+        igraph: dict[str, set[str]] = {name: set() for name in child_graph}
+        for parent, children in child_graph.items():
+            for child in children:
+                if child in existing or dangling == 'include':
+                    igraph.setdefault(child, set()).add(parent)
+        if dangling == 'error':
+            raw = self.child_graph(dangling='include')
+            dangling_refs = set().union(*(children - existing for children in raw.values()))
+            if dangling_refs:
+                raise self._dangling_refs_error(cast('set[str]', dangling_refs), 'building parent graph')
+        return igraph
+
+    def subtree(
+            self,
+            tops: str | Sequence[str],
+            ) -> ILibraryView:
+        if isinstance(tops, str):
+            tops = (tops,)
+        keep = cast('set[str]', self.referenced_patterns(tops) - {None})
+        keep |= set(tops)
+        return self.materialize_many(tuple(keep), persist=True)
+
+    def tops(self) -> list[str]:
+        graph = self.child_graph(dangling='ignore')
+        names = set(graph)
+        not_toplevel: set[str] = set()
+        for children in graph.values():
+            not_toplevel |= children
+        return list(names - not_toplevel)
+
+    def with_ports_from_data(
+            self,
+            *,
+            layers: Sequence[tuple[int, int] | int],
+            max_depth: int = 0,
+            skip_subcells: bool = True,
+            ) -> PortsLibraryView:
+        return PortsLibraryView(
+            self,
+            layers=layers,
+            max_depth=max_depth,
+            skip_subcells=skip_subcells,
+        )
+
+    def close(self) -> None:
+        data = self._source.data
+        if isinstance(data, mmap.mmap):
+            data.close()
+        if self._source.handle is not None:
+            self._source.handle.close()
+            self._source.handle = None
+
+    def __enter__(self) -> ArrowLibrary:
+        return self
+
+    def __exit__(self, *_args: object) -> None:
+        self.close()
+
+    def find_refs_local(
+            self,
+            name: str,
+            parent_graph: dict[str, set[str]] | None = None,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[str, list[NDArray[numpy.float64]]]:
+        instances: dict[str, list[NDArray[numpy.float64]]] = defaultdict(list)
+        if parent_graph is None:
+            graph_mode = 'ignore' if dangling == 'ignore' else 'include'
+            parent_graph = self.parent_graph(dangling=graph_mode)
+
+        if name not in self:
+            if name not in parent_graph:
+                return instances
+            if dangling == 'error':
+                raise self._dangling_refs_error({name}, f'finding local refs for {name!r}')
+            if dangling == 'ignore':
+                return instances
+
+        target_id = self._payload.cells.get(name)
+        for parent in parent_graph.get(name, set()):
+            if parent in self._cache:
+                for ref in self._cache[parent].refs.get(name, []):
+                    instances[parent].append(ref.as_transforms())
+                continue
+
+            if target_id is None or parent not in self._payload.cells:
+                continue
+            rows = self._collect_raw_transforms(self._payload.cells[parent], target_id.cell_id)
+            if rows:
+                instances[parent].extend(rows)
+        return instances
+
+    def find_refs_global(
+            self,
+            name: str,
+            order: list[str] | None = None,
+            parent_graph: dict[str, set[str]] | None = None,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[tuple[str, ...], NDArray[numpy.float64]]:
+        graph_mode = 'ignore' if dangling == 'ignore' else 'include'
+        if order is None:
+            order = self.child_order(dangling=graph_mode)
+        if parent_graph is None:
+            parent_graph = self.parent_graph(dangling=graph_mode)
+
+        if name not in self:
+            if name not in parent_graph:
+                return {}
+            if dangling == 'error':
+                raise self._dangling_refs_error({name}, f'finding global refs for {name!r}')
+            if dangling == 'ignore':
+                return {}
+
+        self_keys = set(self.keys())
+        transforms: dict[str, list[tuple[tuple[str, ...], NDArray[numpy.float64]]]]
+        transforms = defaultdict(list)
+        for parent, vals in self.find_refs_local(name, parent_graph=parent_graph, dangling=dangling).items():
+            transforms[parent] = [((name,), numpy.concatenate(vals))]
+
+        for next_name in order:
+            if next_name not in transforms:
+                continue
+            if not parent_graph.get(next_name, set()) & self_keys:
+                continue
+
+            outers = self.find_refs_local(next_name, parent_graph=parent_graph, dangling=dangling)
+            inners = transforms.pop(next_name)
+            for parent, outer in outers.items():
+                outer_tf = numpy.concatenate(outer)
+                for path, inner in inners:
+                    combined = apply_transforms(outer_tf, inner)
+                    transforms[parent].append(((next_name,) + path, combined))
+
+        result = {}
+        for parent, targets in transforms.items():
+            for path, instances in targets:
+                full_path = (parent,) + path
+                result[full_path] = instances
+        return result
+
+
+def readfile(
+        filename: str | pathlib.Path,
+        ) -> tuple[ArrowLibrary, dict[str, Any]]:
+    lib = ArrowLibrary.from_file(filename)
+    return lib, lib.library_info
+
+
+def load_libraryfile(
+        filename: str | pathlib.Path,
+        ) -> tuple[ArrowLibrary, dict[str, Any]]:
+    return readfile(filename)

masque/file/gdsii_lazy_core.py

@@ -0,0 +1,696 @@
+"""
+Shared helpers for source-backed lazy GDS views.
+
+This module contains the reusable pieces that sit between lazy source readers
+and ordinary mutable library usage:
+
+- `PortsLibraryView` layers a processed, ports-importing cache on top of a raw
+  source view without mutating the source itself
+- `OverlayLibrary` exposes a mutable library surface that can mix source-backed
+  cells with overlay-owned materialized patterns
+- the write helpers preserve source-backed copy-through behavior where
+  possible, falling back to normal pattern serialization when a cell has been
+  materialized or remapped
+
+Both the classic and Arrow-backed lazy GDS readers rely on these helpers.
+"""
+from __future__ import annotations
+
+from dataclasses import dataclass
+from typing import IO, Any, Literal, cast
+from collections import defaultdict
+from collections.abc import Callable, Iterator, Mapping, Sequence
+import copy
+import gzip
+import logging
+import pathlib
+
+import klamath
+import numpy
+from numpy.typing import NDArray
+
+from . import gdsii
+from .utils import tmpfile
+from ..error import LibraryError
+from ..library import ILibrary, ILibraryView, LibraryView, _plan_source_names, _source_rename_map, dangling_mode_t
+from ..pattern import Pattern, map_targets
+from ..utils import apply_transforms
+from ..utils.ports2data import data_to_ports
+
+
+logger = logging.getLogger(__name__)
+
+
+@dataclass
+class _SourceLayer:
+    """ One imported source layer tracked by an `OverlayLibrary`. """
+    library: ILibraryView
+    source_to_visible: dict[str, str]
+    visible_to_source: dict[str, str]
+    child_graph: dict[str, set[str]]
+    order: list[str]
+
+
+@dataclass(frozen=True)
+class _SourceEntry:
+    """ Reference to a single visible source-backed cell in an overlay. """
+    layer_index: int
+    source_name: str
+
+
+def _pattern_children(pat: Pattern) -> set[str]:
+    return {child for child, refs in pat.refs.items() if child is not None and refs}
+
+
+def _remap_pattern_targets(pat: Pattern, remap: Callable[[str | None], str | None]) -> Pattern:
+    if not pat.refs:
+        return pat
+    pat.refs = map_targets(pat.refs, remap)
+    return pat
+
+
+def _coerce_library_view(source: Mapping[str, Pattern] | ILibraryView) -> ILibraryView:
+    if isinstance(source, ILibraryView):
+        return source
+    return LibraryView(source)
+
+
+def _materialize_detached_pattern(view: ILibraryView, name: str) -> Pattern:
+    func = getattr(view, '_materialize_pattern', None)
+    if callable(func):
+        return cast('Pattern', func(name, persist=False))
+    return view[name].deepcopy()
+
+
+class PortsLibraryView(ILibraryView):
+    """
+    Read-only view which imports ports into cells on first materialization.
+
+    The wrapped source remains untouched; this view owns a separate processed
+    cache so direct-copy workflows can continue to use the raw source view.
+
+    Graph queries, source ordering, and copy-through capabilities are delegated
+    to the wrapped source whenever possible, while `__getitem__` and
+    `materialize_many()` return port-imported patterns.
+    """
+
+    def __init__(
+            self,
+            source: ILibraryView,
+            *,
+            layers: Sequence[gdsii.layer_t],
+            max_depth: int = 0,
+            skip_subcells: bool = True,
+            ) -> None:
+        self._source = source
+        self._layers = tuple(layers)
+        self._max_depth = max_depth
+        self._skip_subcells = skip_subcells
+        self._cache: dict[str, Pattern] = {}
+        self._lookups_in_progress: list[str] = []
+        if hasattr(source, 'library_info'):
+            self.library_info = cast('dict[str, Any]', getattr(source, 'library_info'))
+
+    def __getitem__(self, key: str) -> Pattern:
+        return self._materialize_pattern(key, persist=True)
+
+    def __iter__(self) -> Iterator[str]:
+        return iter(self._source)
+
+    def __len__(self) -> int:
+        return len(self._source)
+
+    def __contains__(self, key: object) -> bool:
+        return key in self._source
+
+    def _materialize_pattern(self, name: str, *, persist: bool) -> Pattern:
+        if name in self._cache:
+            return self._cache[name]
+
+        if name in self._lookups_in_progress:
+            chain = ' -> '.join(self._lookups_in_progress + [name])
+            raise LibraryError(
+                f'Detected circular reference or recursive lookup of "{name}".\n'
+                f'Lookup chain: {chain}\n'
+                'This may be caused by an invalid (cyclical) reference, or buggy code.'
+                )
+
+        self._lookups_in_progress.append(name)
+        try:
+            pat = _materialize_detached_pattern(self._source, name)
+            pat = data_to_ports(
+                layers=self._layers,
+                library=self,
+                pattern=pat,
+                name=name,
+                max_depth=self._max_depth,
+                skip_subcells=self._skip_subcells,
+            )
+        finally:
+            self._lookups_in_progress.pop()
+
+        if persist:
+            self._cache[name] = pat
+        return pat
+
+    def materialize_many(
+            self,
+            names: Sequence[str],
+            *,
+            persist: bool = True,
+            ) -> LibraryView:
+        mats = {
+            name: self._materialize_pattern(name, persist=persist)
+            for name in dict.fromkeys(names)
+        }
+        return LibraryView(mats)
+
+    def source_order(self) -> tuple[str, ...]:
+        return self._source.source_order()
+
+    def child_graph(
+            self,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[str, set[str]]:
+        return self._source.child_graph(dangling=dangling)
+
+    def parent_graph(
+            self,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[str, set[str]]:
+        return self._source.parent_graph(dangling=dangling)
+
+    def subtree(
+            self,
+            tops: str | Sequence[str],
+            ) -> ILibraryView:
+        if isinstance(tops, str):
+            tops = (tops,)
+        keep = cast('set[str]', self._source.referenced_patterns(tops) - {None})
+        keep |= set(tops)
+        return self.materialize_many(tuple(keep), persist=True)
+
+    def tops(self) -> list[str]:
+        return self._source.tops()
+
+    def find_refs_local(
+            self,
+            name: str,
+            parent_graph: dict[str, set[str]] | None = None,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[str, list[NDArray[numpy.float64]]]:
+        finder = getattr(self._source, 'find_refs_local', None)
+        if callable(finder):
+            return cast('dict[str, list[NDArray[numpy.float64]]]', finder(name, parent_graph=parent_graph, dangling=dangling))
+        return super().find_refs_local(name, parent_graph=parent_graph, dangling=dangling)
+
+    def find_refs_global(
+            self,
+            name: str,
+            order: list[str] | None = None,
+            parent_graph: dict[str, set[str]] | None = None,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[tuple[str, ...], NDArray[numpy.float64]]:
+        finder = getattr(self._source, 'find_refs_global', None)
+        if callable(finder):
+            return cast(
+                'dict[tuple[str, ...], NDArray[numpy.float64]]',
+                finder(name, order=order, parent_graph=parent_graph, dangling=dangling),
+            )
+        return super().find_refs_global(name, order=order, parent_graph=parent_graph, dangling=dangling)
+
+    def raw_struct_bytes(self, name: str) -> bytes:
+        reader = getattr(self._source, 'raw_struct_bytes', None)
+        if not callable(reader):
+            raise AttributeError('raw_struct_bytes')
+        return cast('bytes', reader(name))
+
+    def can_copy_raw_struct(self, name: str) -> bool:
+        can_copy = getattr(self._source, 'can_copy_raw_struct', None)
+        if not callable(can_copy):
+            return False
+        return bool(can_copy(name))
+
+    def close(self) -> None:
+        closer = getattr(self._source, 'close', None)
+        if callable(closer):
+            closer()
+
+    def __enter__(self) -> PortsLibraryView:
+        return self
+
+    def __exit__(self, *_args: object) -> None:
+        self.close()
+
+
+class OverlayLibrary(ILibrary):
+    """
+    Mutable overlay over one or more source libraries.
+
+    Source-backed cells remain lazy until accessed through `__getitem__`, at
+    which point that visible cell is promoted into an overlay-owned materialized
+    `Pattern`.
+
+    This is the main mutable integration surface for lazy GDS content. It lets
+    callers:
+    - expose one or more source-backed libraries behind a normal `ILibrary`
+      interface
+    - add or replace cells with overlay-owned patterns
+    - rename visible source cells
+    - remap references without immediately rewriting untouched source structs
+    """
+
+    def __init__(self) -> None:
+        self._layers: list[_SourceLayer] = []
+        self._entries: dict[str, Pattern | _SourceEntry] = {}
+        self._order: list[str] = []
+        self._target_remap: dict[str, str] = {}
+
+    def __iter__(self) -> Iterator[str]:
+        return (name for name in self._order if name in self._entries)
+
+    def __len__(self) -> int:
+        return len(self._entries)
+
+    def __contains__(self, key: object) -> bool:
+        return key in self._entries
+
+    def __getitem__(self, key: str) -> Pattern:
+        return self._materialize_pattern(key, persist=True)
+
+    def __setitem__(
+            self,
+            key: str,
+            value: Pattern | Callable[[], Pattern],
+            ) -> None:
+        if key in self._entries:
+            raise LibraryError(f'"{key}" already exists in the library. Overwriting is not allowed!')
+        pattern = value() if callable(value) else value
+        self._entries[key] = pattern
+        if key not in self._order:
+            self._order.append(key)
+
+    def __delitem__(self, key: str) -> None:
+        if key not in self._entries:
+            raise KeyError(key)
+        del self._entries[key]
+
+    def _merge(self, key_self: str, other: Mapping[str, Pattern], key_other: str) -> None:
+        self[key_self] = copy.deepcopy(other[key_other])
+
+    def add_source(
+            self,
+            source: Mapping[str, Pattern] | ILibraryView,
+            *,
+            rename_theirs: Callable[[ILibraryView, str], str] | None = None,
+            rename_when: Literal['conflict', 'always'] = 'conflict',
+            ) -> dict[str, str]:
+        """
+        Add a source-backed library layer.
+
+        Args:
+            rename_theirs: Function used to choose visible names for imported
+                source cells.
+            rename_when: If `'conflict'`, only conflicting names are renamed.
+                If `'always'`, every imported source name is passed through
+                `rename_theirs`.
+        """
+        view = _coerce_library_view(source)
+        source_order = list(view.source_order())
+        child_graph = view.child_graph(dangling='include')
+
+        source_to_visible = _plan_source_names(
+            self,
+            source_order,
+            self._entries,
+            rename_theirs = rename_theirs,
+            rename_when = rename_when,
+            )
+        visible_to_source = {visible: source_name for source_name, visible in source_to_visible.items()}
+
+        layer = _SourceLayer(
+            library=view,
+            source_to_visible=source_to_visible,
+            visible_to_source=visible_to_source,
+            child_graph=child_graph,
+            order=[source_to_visible[name] for name in source_order],
+        )
+        layer_index = len(self._layers)
+        self._layers.append(layer)
+
+        for source_name, visible_name in source_to_visible.items():
+            self._entries[visible_name] = _SourceEntry(layer_index=layer_index, source_name=source_name)
+            if visible_name not in self._order:
+                self._order.append(visible_name)
+
+        return _source_rename_map(source_to_visible)
+
+    def rename(
+            self,
+            old_name: str,
+            new_name: str,
+            move_references: bool = False,
+            ) -> OverlayLibrary:
+        if old_name not in self._entries:
+            raise LibraryError(f'"{old_name}" does not exist in the library.')
+        if old_name == new_name:
+            return self
+        if new_name in self._entries:
+            raise LibraryError(f'"{new_name}" already exists in the library.')
+
+        entry = self._entries.pop(old_name)
+        self._entries[new_name] = entry
+        if isinstance(entry, _SourceEntry):
+            layer = self._layers[entry.layer_index]
+            layer.source_to_visible[entry.source_name] = new_name
+            del layer.visible_to_source[old_name]
+            layer.visible_to_source[new_name] = entry.source_name
+
+        idx = self._order.index(old_name)
+        self._order[idx] = new_name
+
+        if move_references:
+            self.move_references(old_name, new_name)
+        return self
+
+    def _resolve_target(self, target: str) -> str:
+        seen: set[str] = set()
+        current = target
+        while current in self._target_remap:
+            if current in seen:
+                raise LibraryError(f'Cycle encountered while resolving target remap for {target!r}')
+            seen.add(current)
+            current = self._target_remap[current]
+        return current
+
+    def _set_target_remap(self, old_target: str, new_target: str) -> None:
+        resolved_new = self._resolve_target(new_target)
+        if resolved_new == old_target:
+            raise LibraryError(f'Ref target remap would create a cycle: {old_target!r} -> {new_target!r}')
+        self._target_remap[old_target] = resolved_new
+        for key in list(self._target_remap):
+            self._target_remap[key] = self._resolve_target(self._target_remap[key])
+
+    def move_references(self, old_target: str, new_target: str) -> OverlayLibrary:
+        if old_target == new_target:
+            return self
+        self._set_target_remap(old_target, new_target)
+        for entry in list(self._entries.values()):
+            if isinstance(entry, Pattern) and old_target in entry.refs:
+                entry.refs[new_target].extend(entry.refs[old_target])
+                del entry.refs[old_target]
+        return self
+
+    def _effective_target(self, layer: _SourceLayer, target: str) -> str:
+        visible = layer.source_to_visible.get(target, target)
+        return self._resolve_target(visible)
+
+    def _materialize_pattern(self, name: str, *, persist: bool) -> Pattern:
+        if name not in self._entries:
+            raise KeyError(name)
+        entry = self._entries[name]
+        if isinstance(entry, Pattern):
+            return entry
+
+        layer = self._layers[entry.layer_index]
+        source_pat = layer.library[entry.source_name].deepcopy()
+        remap = lambda target: None if target is None else self._effective_target(layer, target)
+        pat = _remap_pattern_targets(source_pat, remap)
+        if persist:
+            self._entries[name] = pat
+        return pat
+
+    def child_graph(
+            self,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[str, set[str]]:
+        graph: dict[str, set[str]] = {}
+        for name in self._order:
+            if name not in self._entries:
+                continue
+            entry = self._entries[name]
+            if isinstance(entry, Pattern):
+                graph[name] = _pattern_children(entry)
+                continue
+            layer = self._layers[entry.layer_index]
+            children = {self._effective_target(layer, child) for child in layer.child_graph.get(entry.source_name, set())}
+            graph[name] = children
+
+        existing = set(graph)
+        dangling_refs = set().union(*(children - existing for children in graph.values()))
+        if dangling == 'error':
+            if dangling_refs:
+                raise self._dangling_refs_error(cast('set[str]', dangling_refs), 'building child graph')
+            return graph
+        if dangling == 'ignore':
+            return {name: {child for child in children if child in existing} for name, children in graph.items()}
+
+        for child in dangling_refs:
+            graph.setdefault(cast('str', child), set())
+        return graph
+
+    def parent_graph(
+            self,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[str, set[str]]:
+        child_graph = self.child_graph(dangling='include' if dangling == 'include' else 'ignore')
+        existing = set(self.keys())
+        igraph: dict[str, set[str]] = {name: set() for name in child_graph}
+        for parent, children in child_graph.items():
+            for child in children:
+                if child in existing or dangling == 'include':
+                    igraph.setdefault(child, set()).add(parent)
+        if dangling == 'error':
+            raw = self.child_graph(dangling='include')
+            dangling_refs = set().union(*(children - existing for children in raw.values()))
+            if dangling_refs:
+                raise self._dangling_refs_error(cast('set[str]', dangling_refs), 'building parent graph')
+        return igraph
+
+    def subtree(
+            self,
+            tops: str | Sequence[str],
+            ) -> ILibraryView:
+        if isinstance(tops, str):
+            tops = (tops,)
+        keep = cast('set[str]', self.referenced_patterns(tops) - {None})
+        keep |= set(tops)
+        return LibraryView({name: self[name] for name in keep})
+
+    def find_refs_local(
+            self,
+            name: str,
+            parent_graph: dict[str, set[str]] | None = None,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[str, list[NDArray[numpy.float64]]]:
+        instances: dict[str, list[NDArray[numpy.float64]]] = defaultdict(list)
+        if parent_graph is None:
+            graph_mode = 'ignore' if dangling == 'ignore' else 'include'
+            parent_graph = self.parent_graph(dangling=graph_mode)
+
+        if name not in self:
+            if name not in parent_graph:
+                return instances
+            if dangling == 'error':
+                raise self._dangling_refs_error({name}, f'finding local refs for {name!r}')
+            if dangling == 'ignore':
+                return instances
+
+        for parent in parent_graph.get(name, set()):
+            pat = self._materialize_pattern(parent, persist=False)
+            for ref in pat.refs.get(name, []):
+                instances[parent].append(ref.as_transforms())
+        return instances
+
+    def find_refs_global(
+            self,
+            name: str,
+            order: list[str] | None = None,
+            parent_graph: dict[str, set[str]] | None = None,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[tuple[str, ...], NDArray[numpy.float64]]:
+        graph_mode = 'ignore' if dangling == 'ignore' else 'include'
+        if order is None:
+            order = self.child_order(dangling=graph_mode)
+        if parent_graph is None:
+            parent_graph = self.parent_graph(dangling=graph_mode)
+
+        if name not in self:
+            if name not in parent_graph:
+                return {}
+            if dangling == 'error':
+                raise self._dangling_refs_error({name}, f'finding global refs for {name!r}')
+            if dangling == 'ignore':
+                return {}
+
+        self_keys = set(self.keys())
+        transforms: dict[str, list[tuple[tuple[str, ...], NDArray[numpy.float64]]]]
+        transforms = defaultdict(list)
+        for parent, vals in self.find_refs_local(name, parent_graph=parent_graph, dangling=dangling).items():
+            transforms[parent] = [((name,), numpy.concatenate(vals))]
+
+        for next_name in order:
+            if next_name not in transforms:
+                continue
+            if not parent_graph.get(next_name, set()) & self_keys:
+                continue
+
+            outers = self.find_refs_local(next_name, parent_graph=parent_graph, dangling=dangling)
+            inners = transforms.pop(next_name)
+            for parent, outer in outers.items():
+                outer_tf = numpy.concatenate(outer)
+                for path, inner in inners:
+                    combined = apply_transforms(outer_tf, inner)
+                    transforms[parent].append(((next_name,) + path, combined))
+
+        result = {}
+        for parent, targets in transforms.items():
+            for path, instances in targets:
+                result[(parent,) + path] = instances
+        return result
+
+    def source_order(self) -> tuple[str, ...]:
+        return tuple(name for name in self._order if name in self._entries)
+
+
+def _iter_library_infos(library: Mapping[str, Pattern] | ILibraryView) -> Iterator[dict[str, Any]]:
+    info = getattr(library, 'library_info', None)
+    if isinstance(info, dict):
+        yield info
+    if isinstance(library, OverlayLibrary):
+        for layer in library._layers:
+            yield from _iter_library_infos(layer.library)
+
+
+def _get_write_info(
+        library: Mapping[str, Pattern] | ILibraryView,
+        *,
+        meters_per_unit: float | None,
+        logical_units_per_unit: float | None,
+        library_name: str | None,
+        ) -> tuple[float, float, str]:
+    if meters_per_unit is not None and logical_units_per_unit is not None and library_name is not None:
+        return meters_per_unit, logical_units_per_unit, library_name
+
+    infos = list(_iter_library_infos(library))
+    if infos:
+        unit_pairs = {(info['meters_per_unit'], info['logical_units_per_unit']) for info in infos}
+        if len(unit_pairs) > 1:
+            raise LibraryError('Merged lazy GDS sources must have identical units before writing')
+        info = infos[0]
+        meters = info['meters_per_unit'] if meters_per_unit is None else meters_per_unit
+        logical = info['logical_units_per_unit'] if logical_units_per_unit is None else logical_units_per_unit
+        name = info['name'] if library_name is None else library_name
+        return meters, logical, name
+
+    if meters_per_unit is None or logical_units_per_unit is None or library_name is None:
+        raise LibraryError('meters_per_unit, logical_units_per_unit, and library_name are required for non-GDS-backed lazy writes')
+    return meters_per_unit, logical_units_per_unit, library_name
+
+
+def _can_copy_raw_cell(library: Mapping[str, Pattern] | ILibraryView, name: str) -> bool:
+    can_copy = getattr(library, 'can_copy_raw_struct', None)
+    if not callable(can_copy):
+        return False
+    return bool(can_copy(name))
+
+
+def _raw_struct_bytes(library: Mapping[str, Pattern] | ILibraryView, name: str) -> bytes:
+    reader = getattr(library, 'raw_struct_bytes', None)
+    if not callable(reader):
+        raise AttributeError('raw_struct_bytes')
+    return cast('bytes', reader(name))
+
+
+def _can_copy_overlay_cell(library: OverlayLibrary, name: str, entry: _SourceEntry) -> bool:
+    layer = library._layers[entry.layer_index]
+    if name != entry.source_name:
+        return False
+    if not _can_copy_raw_cell(layer.library, entry.source_name):
+        return False
+    children = layer.child_graph.get(entry.source_name, set())
+    return all(library._effective_target(layer, child) == child for child in children)
+
+
+def _write_pattern_struct(stream: IO[bytes], name: str, pat: Pattern) -> None:
+    elements: list[klamath.elements.Element] = []
+    elements += gdsii._shapes_to_elements(pat.shapes)
+    elements += gdsii._labels_to_texts(pat.labels)
+    elements += gdsii._mrefs_to_grefs(pat.refs)
+    klamath.library.write_struct(stream, name=name.encode('ASCII'), elements=elements)
+
+
+def write(
+        library: Mapping[str, Pattern] | ILibraryView,
+        stream: IO[bytes],
+        *,
+        meters_per_unit: float | None = None,
+        logical_units_per_unit: float | None = None,
+        library_name: str | None = None,
+        ) -> None:
+    meters_per_unit, logical_units_per_unit, library_name = _get_write_info(
+        library,
+        meters_per_unit=meters_per_unit,
+        logical_units_per_unit=logical_units_per_unit,
+        library_name=library_name,
+    )
+
+    header = klamath.library.FileHeader(
+        name=library_name.encode('ASCII'),
+        user_units_per_db_unit=logical_units_per_unit,
+        meters_per_db_unit=meters_per_unit,
+    )
+    header.write(stream)
+
+    if isinstance(library, OverlayLibrary):
+        for name in library.source_order():
+            entry = library._entries[name]
+            if isinstance(entry, _SourceEntry) and _can_copy_overlay_cell(library, name, entry):
+                layer = library._layers[entry.layer_index]
+                stream.write(_raw_struct_bytes(layer.library, entry.source_name))
+            else:
+                _write_pattern_struct(stream, name, library._materialize_pattern(name, persist=False))
+        klamath.records.ENDLIB.write(stream, None)
+        return
+
+    if hasattr(library, 'raw_struct_bytes'):
+        for name in library.source_order():
+            if _can_copy_raw_cell(library, name):
+                stream.write(_raw_struct_bytes(library, name))
+            else:
+                _write_pattern_struct(stream, name, _materialize_detached_pattern(cast('ILibraryView', library), name))
+        klamath.records.ENDLIB.write(stream, None)
+        return
+
+    gdsii.write(cast('Mapping[str, Pattern]', library), stream, meters_per_unit, logical_units_per_unit, library_name)
+
+
+def writefile(
+        library: Mapping[str, Pattern] | ILibraryView,
+        filename: str | pathlib.Path,
+        *,
+        meters_per_unit: float | None = None,
+        logical_units_per_unit: float | None = None,
+        library_name: str | None = None,
+        ) -> None:
+    path = pathlib.Path(filename)
+
+    with tmpfile(path) as base_stream:
+        streams: tuple[Any, ...] = (base_stream,)
+        if path.suffix == '.gz':
+            stream = cast('IO[bytes]', gzip.GzipFile(filename='', mtime=0, fileobj=base_stream, mode='wb', compresslevel=6))
+            streams = (stream,) + streams
+        else:
+            stream = base_stream
+
+        try:
+            write(
+                library,
+                stream,
+                meters_per_unit=meters_per_unit,
+                logical_units_per_unit=logical_units_per_unit,
+                library_name=library_name,
+            )
+        finally:
+            for ss in streams:
+                ss.close()

masque/file/gdsii_perf.py

@@ -0,0 +1,633 @@
+"""
+Synthetic GDS fixture generation for reader/writer performance testing.
+
+The presets here are intentionally hierarchical and deterministic. They aim to
+approximate a pair of real-world layout families discussed during GDS reader and
+writer work:
+
+* `many_cells`: tens of thousands of cells, moderate reference count, very heavy
+  box usage after flattening, and moderate polygon density.
+* `many_instances`: a much smaller cell library with very high reference count,
+  similar box density, and far fewer polygons.
+
+Fixtures are written by streaming structures through `klamath` directly so large
+benchmark files can be produced without first materializing an equally large
+`masque.Library` in Python.
+"""
+from __future__ import annotations
+
+from dataclasses import asdict, dataclass
+from pathlib import Path
+from typing import Any
+import argparse
+import json
+import math
+
+import numpy
+import klamath
+from klamath import elements
+
+
+EMPTY_PROPERTIES: dict[int, bytes] = {}
+METERS_PER_DB_UNIT = 1e-9
+USER_UNITS_PER_DB_UNIT = 1e-3
+TOTAL_LAYERS = 200
+
+
+@dataclass(frozen=True)
+class FixturePreset:
+    name: str
+    total_layers: int
+    box_layers: int
+    heavy_box_layers: int
+    polygon_layers: int
+    box_cells: int
+    poly_cells: int
+    box_wrappers: int
+    poly_wrappers: int
+    box_clusters: int
+    poly_clusters: int
+    box_cluster_refs: int
+    poly_cluster_refs: int
+    top_direct_box_refs: int
+    top_direct_poly_refs: int
+    heavy_boxes_per_cell: int
+    regular_boxes_per_cell: int
+    polygons_per_cell: int
+    path_stride: int
+    text_stride: int
+    box_cluster_array: tuple[int, int]
+    top_box_array: tuple[int, int]
+    poly_cluster_array: tuple[int, int]
+    top_poly_array: tuple[int, int]
+    rare_annotation_stride: int
+
+
+PRESETS: dict[str, FixturePreset] = {
+    'many_cells': FixturePreset(
+        name='many_cells',
+        total_layers=TOTAL_LAYERS,
+        box_layers=20,
+        heavy_box_layers=3,
+        polygon_layers=20,
+        box_cells=17_000,
+        poly_cells=6_000,
+        box_wrappers=18_000,
+        poly_wrappers=6_000,
+        box_clusters=2_000,
+        poly_clusters=999,
+        box_cluster_refs=24,
+        poly_cluster_refs=16,
+        top_direct_box_refs=21_000,
+        top_direct_poly_refs=7_000,
+        heavy_boxes_per_cell=6,
+        regular_boxes_per_cell=2,
+        polygons_per_cell=50,
+        path_stride=2,
+        text_stride=3,
+        box_cluster_array=(24, 16),
+        top_box_array=(8, 8),
+        poly_cluster_array=(4, 2),
+        top_poly_array=(3, 2),
+        rare_annotation_stride=1_250,
+        ),
+    'many_instances': FixturePreset(
+        name='many_instances',
+        total_layers=TOTAL_LAYERS,
+        box_layers=25,
+        heavy_box_layers=3,
+        polygon_layers=10,
+        box_cells=2_500,
+        poly_cells=500,
+        box_wrappers=1_000,
+        poly_wrappers=500,
+        box_clusters=1_000,
+        poly_clusters=499,
+        box_cluster_refs=1_200,
+        poly_cluster_refs=400,
+        top_direct_box_refs=102_001,
+        top_direct_poly_refs=0,
+        heavy_boxes_per_cell=40,
+        regular_boxes_per_cell=16,
+        polygons_per_cell=60,
+        path_stride=1,
+        text_stride=2,
+        box_cluster_array=(1, 1),
+        top_box_array=(1, 1),
+        poly_cluster_array=(1, 1),
+        top_poly_array=(1, 1),
+        rare_annotation_stride=250,
+        ),
+    }
+
+
+@dataclass(frozen=True)
+class FixtureManifest:
+    preset: str
+    scale: float
+    gds_path: str
+    library_name: str
+    cells: int
+    refs: int
+    layers: int
+    box_layers: int
+    heavy_box_layers: list[list[int]]
+    polygon_layers: list[list[int]]
+    hierarchical_boxes_per_heavy_layer: int
+    hierarchical_boxes_per_regular_layer: int
+    hierarchical_polygons_total: int
+    hierarchical_paths_total: int
+    hierarchical_texts_total: int
+    flattened_box_placements: int
+    flattened_poly_placements: int
+    estimated_flat_boxes_per_heavy_layer: int
+    estimated_flat_polygons_per_active_polygon_layer: int
+
+
+def _scaled_count(value: int, scale: float, minimum: int = 0) -> int:
+    if value == 0:
+        return 0
+    scaled = int(math.ceil(value * scale))
+    return max(minimum, scaled)
+
+
+def _scaled_preset(preset: FixturePreset, scale: float) -> FixturePreset:
+    if scale <= 0:
+        raise ValueError(f'scale must be positive, got {scale!r}')
+
+    return FixturePreset(
+        name=preset.name,
+        total_layers=preset.total_layers,
+        box_layers=min(preset.box_layers, preset.total_layers),
+        heavy_box_layers=min(preset.heavy_box_layers, preset.box_layers),
+        polygon_layers=min(preset.polygon_layers, preset.total_layers),
+        box_cells=_scaled_count(preset.box_cells, scale, minimum=1),
+        poly_cells=_scaled_count(preset.poly_cells, scale, minimum=1),
+        box_wrappers=_scaled_count(preset.box_wrappers, scale),
+        poly_wrappers=_scaled_count(preset.poly_wrappers, scale),
+        box_clusters=_scaled_count(preset.box_clusters, scale, minimum=1),
+        poly_clusters=_scaled_count(preset.poly_clusters, scale, minimum=1),
+        box_cluster_refs=_scaled_count(preset.box_cluster_refs, scale, minimum=1),
+        poly_cluster_refs=_scaled_count(preset.poly_cluster_refs, scale, minimum=1),
+        top_direct_box_refs=_scaled_count(preset.top_direct_box_refs, scale),
+        top_direct_poly_refs=_scaled_count(preset.top_direct_poly_refs, scale),
+        heavy_boxes_per_cell=max(1, preset.heavy_boxes_per_cell),
+        regular_boxes_per_cell=max(1, preset.regular_boxes_per_cell),
+        polygons_per_cell=max(1, preset.polygons_per_cell),
+        path_stride=max(1, preset.path_stride),
+        text_stride=max(1, preset.text_stride),
+        box_cluster_array=preset.box_cluster_array,
+        top_box_array=preset.top_box_array,
+        poly_cluster_array=preset.poly_cluster_array,
+        top_poly_array=preset.top_poly_array,
+        rare_annotation_stride=max(1, _scaled_count(preset.rare_annotation_stride, scale, minimum=1)),
+        )
+
+
+def _rect_xy(xmin: int, ymin: int, xmax: int, ymax: int) -> numpy.ndarray[Any, numpy.dtype[numpy.int32]]:
+    return numpy.array(
+        [[xmin, ymin], [xmin, ymax], [xmax, ymax], [xmax, ymin], [xmin, ymin]],
+        dtype=numpy.int32,
+        )
+
+
+def _poly_xy(points: list[tuple[int, int]]) -> numpy.ndarray[Any, numpy.dtype[numpy.int32]]:
+    closed = points + [points[0]]
+    return numpy.array(closed, dtype=numpy.int32)
+
+
+def _sref(
+        target: str,
+        xy: tuple[int, int],
+        properties: dict[int, bytes] | None = None,
+        ) -> elements.Reference:
+    return klamath.library.Reference(
+        struct_name=target.encode('ASCII'),
+        invert_y=False,
+        mag=1.0,
+        angle_deg=0.0,
+        xy=numpy.array([xy], dtype=numpy.int32),
+        colrow=None,
+        properties=EMPTY_PROPERTIES if properties is None else properties,
+        )
+
+
+def _aref(
+        target: str,
+        origin: tuple[int, int],
+        counts: tuple[int, int],
+        step: tuple[int, int],
+        properties: dict[int, bytes] | None = None,
+        ) -> elements.Reference:
+    cols, rows = counts
+    dx, dy = step
+    xy = numpy.array(
+        [
+            origin,
+            (origin[0] + cols * dx, origin[1]),
+            (origin[0], origin[1] + rows * dy),
+            ],
+        dtype=numpy.int32,
+        )
+    return klamath.library.Reference(
+        struct_name=target.encode('ASCII'),
+        invert_y=False,
+        mag=1.0,
+        angle_deg=0.0,
+        xy=xy,
+        colrow=(cols, rows),
+        properties=EMPTY_PROPERTIES if properties is None else properties,
+        )
+
+
+def _annotation(index: int) -> dict[int, bytes]:
+    return {1: f'perf-{index}'.encode('ASCII')}
+
+
+def _make_box_cell(name: str, index: int, cfg: FixturePreset) -> list[elements.Element]:
+    cell_elements: list[elements.Element] = []
+    xbase = (index % 17) * 600
+    ybase = (index // 17) * 180
+
+    for layer in range(cfg.heavy_box_layers):
+        for box_idx in range(cfg.heavy_boxes_per_cell):
+            x0 = xbase + box_idx * 22
+            y0 = ybase + layer * 40
+            width = 10 + ((index + box_idx + layer) % 7) * 6
+            height = 10 + ((index * 3 + box_idx + layer) % 5) * 8
+            properties = _annotation(index) if index % cfg.rare_annotation_stride == 0 and box_idx == 0 and layer == 0 else EMPTY_PROPERTIES
+            cell_elements.append(elements.Boundary(
+                layer=(layer, 0),
+                xy=_rect_xy(x0, y0, x0 + width, y0 + height),
+                properties=properties,
+                ))
+
+    for layer in range(cfg.heavy_box_layers, cfg.box_layers):
+        for box_idx in range(cfg.regular_boxes_per_cell):
+            x0 = xbase + box_idx * 38
+            y0 = ybase + (layer - cfg.heavy_box_layers) * 28 + 400
+            width = 18 + ((index + layer + box_idx) % 9) * 4
+            height = 12 + ((index + 2 * layer + box_idx) % 6) * 5
+            cell_elements.append(elements.Boundary(
+                layer=(layer, 0),
+                xy=_rect_xy(x0, y0, x0 + width, y0 + height),
+                properties=EMPTY_PROPERTIES,
+                ))
+
+    return cell_elements
+
+
+def _make_poly_cell(name: str, index: int, cfg: FixturePreset) -> list[elements.Element]:
+    cell_elements: list[elements.Element] = []
+    xbase = (index % 19) * 900
+    ybase = (index // 19) * 260
+
+    for poly_idx in range(cfg.polygons_per_cell):
+        layer = poly_idx % cfg.polygon_layers
+        dx = xbase + (poly_idx % 5) * 120
+        dy = ybase + (poly_idx // 5) * 80
+        size = 18 + ((index + poly_idx + layer) % 11) * 7
+        points = [
+            (dx, dy),
+            (dx + size, dy + size // 5),
+            (dx + size + size // 3, dy + size),
+            (dx + size // 2, dy + size + size // 2),
+            (dx - size // 4, dy + size // 2),
+            ]
+        properties = _annotation(index) if poly_idx == 0 and index % cfg.rare_annotation_stride == 0 else EMPTY_PROPERTIES
+        cell_elements.append(elements.Boundary(
+            layer=(layer, 0),
+            xy=_poly_xy(points),
+            properties=properties,
+            ))
+
+    if index % cfg.path_stride == 0:
+        layer = index % cfg.polygon_layers
+        cell_elements.append(elements.Path(
+            layer=(layer, 1),
+            path_type=2,
+            width=12 + (index % 5) * 4,
+            extension=(0, 0),
+            xy=numpy.array(
+                [
+                    [xbase, ybase + 900],
+                    [xbase + 240, ybase + 930],
+                    [xbase + 420, ybase + 960],
+                    ],
+                dtype=numpy.int32,
+                ),
+            properties=EMPTY_PROPERTIES,
+            ))
+
+    if index % cfg.text_stride == 0:
+        layer = index % cfg.polygon_layers
+        properties = _annotation(index) if index % cfg.rare_annotation_stride == 0 else EMPTY_PROPERTIES
+        cell_elements.append(elements.Text(
+            layer=(layer, 2),
+            presentation=0,
+            path_type=0,
+            width=0,
+            invert_y=False,
+            mag=1.0,
+            angle_deg=0.0,
+            xy=numpy.array([[xbase + 64, ybase + 1536]], dtype=numpy.int32),
+            string=f'T{index:05d}'.encode('ASCII'),
+            properties=properties,
+            ))
+
+    return cell_elements
+
+
+def _write_struct(stream: Any, name: str, cell_elements: list[elements.Element]) -> None:
+    klamath.library.write_struct(stream, name=name.encode('ASCII'), elements=cell_elements)
+
+
+def _box_name(index: int) -> str:
+    return f'box_{index:05d}'
+
+
+def _poly_name(index: int) -> str:
+    return f'poly_{index:05d}'
+
+
+def _box_wrapper_name(index: int) -> str:
+    return f'box_wrap_{index:05d}'
+
+
+def _poly_wrapper_name(index: int) -> str:
+    return f'poly_wrap_{index:05d}'
+
+
+def _box_cluster_name(index: int) -> str:
+    return f'box_cluster_{index:05d}'
+
+
+def _poly_cluster_name(index: int) -> str:
+    return f'poly_cluster_{index:05d}'
+
+
+def _write_box_cells(stream: Any, cfg: FixturePreset) -> None:
+    for idx in range(cfg.box_cells):
+        _write_struct(stream, _box_name(idx), _make_box_cell(_box_name(idx), idx, cfg))
+
+
+def _write_poly_cells(stream: Any, cfg: FixturePreset) -> None:
+    for idx in range(cfg.poly_cells):
+        _write_struct(stream, _poly_name(idx), _make_poly_cell(_poly_name(idx), idx, cfg))
+
+
+def _write_wrappers(stream: Any, cfg: FixturePreset) -> None:
+    for idx in range(cfg.box_wrappers):
+        target = _box_name(idx % cfg.box_cells)
+        origin = ((idx % 97) * 2_000, (idx // 97) * 2_000)
+        _write_struct(stream, _box_wrapper_name(idx), [_sref(target, origin)])
+
+    for idx in range(cfg.poly_wrappers):
+        target = _poly_name(idx % cfg.poly_cells)
+        origin = ((idx % 61) * 3_200, (idx // 61) * 3_200)
+        _write_struct(stream, _poly_wrapper_name(idx), [_sref(target, origin)])
+
+
+def _write_box_clusters(stream: Any, cfg: FixturePreset) -> None:
+    array_refs = min(cfg.box_cluster_refs, max(1, (3 * cfg.box_cluster_refs) // 4))
+    for idx in range(cfg.box_clusters):
+        cell_elements: list[elements.Element] = []
+        for ref_idx in range(cfg.box_cluster_refs):
+            target = _box_name((idx * cfg.box_cluster_refs + ref_idx) % cfg.box_cells)
+            origin = (
+                (ref_idx % 6) * 48_000,
+                (ref_idx // 6) * 48_000,
+                )
+            if ref_idx < array_refs:
+                cell_elements.append(_aref(target, origin, cfg.box_cluster_array, (720, 900)))
+            else:
+                cell_elements.append(_sref(target, origin))
+        _write_struct(stream, _box_cluster_name(idx), cell_elements)
+
+
+def _write_poly_clusters(stream: Any, cfg: FixturePreset) -> None:
+    array_refs = min(cfg.poly_cluster_refs, cfg.poly_cluster_refs // 2)
+    for idx in range(cfg.poly_clusters):
+        cell_elements: list[elements.Element] = []
+        for ref_idx in range(cfg.poly_cluster_refs):
+            target = _poly_name((idx * cfg.poly_cluster_refs + ref_idx) % cfg.poly_cells)
+            origin = (
+                (ref_idx % 10) * 96_000,
+                (ref_idx // 10) * 96_000,
+                )
+            if ref_idx < array_refs:
+                cell_elements.append(_aref(target, origin, cfg.poly_cluster_array, (12_000, 8_500)))
+            else:
+                cell_elements.append(_sref(target, origin))
+        _write_struct(stream, _poly_cluster_name(idx), cell_elements)
+
+
+def _top_box_refs(cfg: FixturePreset) -> list[elements.Reference]:
+    refs: list[elements.Reference] = []
+
+    for idx in range(cfg.box_wrappers):
+        refs.append(_sref(
+            _box_wrapper_name(idx),
+            ((idx % 240) * 240_000, (idx // 240) * 240_000),
+            ))
+
+    for idx in range(cfg.box_clusters):
+        refs.append(_sref(
+            _box_cluster_name(idx),
+            ((idx % 100) * 800_000, (idx // 100) * 800_000 + 14_000_000),
+            ))
+
+    for idx in range(cfg.top_direct_box_refs):
+        target = _box_name(idx % cfg.box_cells)
+        origin = (
+            (idx % 150) * 160_000,
+            (idx // 150) * 160_000 + 26_000_000,
+            )
+        if cfg.top_box_array == (1, 1):
+            refs.append(_sref(target, origin))
+        else:
+            refs.append(_aref(target, origin, cfg.top_box_array, (1_100, 1_350)))
+
+    return refs
+
+
+def _top_poly_refs(cfg: FixturePreset) -> list[elements.Reference]:
+    refs: list[elements.Reference] = []
+
+    for idx in range(cfg.poly_wrappers):
+        refs.append(_sref(
+            _poly_wrapper_name(idx),
+            ((idx % 180) * 360_000, (idx // 180) * 360_000 + 44_000_000),
+            ))
+
+    for idx in range(cfg.poly_clusters):
+        refs.append(_sref(
+            _poly_cluster_name(idx),
+            ((idx % 70) * 1_100_000, (idx // 70) * 1_100_000 + 58_000_000),
+            ))
+
+    for idx in range(cfg.top_direct_poly_refs):
+        target = _poly_name(idx % cfg.poly_cells)
+        origin = (
+            (idx % 110) * 420_000,
+            (idx // 110) * 420_000 + 72_000_000,
+            )
+        if cfg.top_poly_array == (1, 1):
+            refs.append(_sref(target, origin))
+        else:
+            refs.append(_aref(target, origin, cfg.top_poly_array, (16_000, 14_000)))
+
+    return refs
+
+
+def _write_top(stream: Any, cfg: FixturePreset) -> None:
+    cell_elements: list[elements.Element] = []
+    cell_elements.extend(_top_box_refs(cfg))
+    cell_elements.extend(_top_poly_refs(cfg))
+    _write_struct(stream, 'TOP', cell_elements)
+
+
+def _poly_paths_total(cfg: FixturePreset) -> int:
+    return (cfg.poly_cells - 1) // cfg.path_stride + 1
+
+
+def _poly_texts_total(cfg: FixturePreset) -> int:
+    return (cfg.poly_cells - 1) // cfg.text_stride + 1
+
+
+def _ref_instances_per_box_cluster(cfg: FixturePreset) -> int:
+    array_refs = min(cfg.box_cluster_refs, max(1, (3 * cfg.box_cluster_refs) // 4))
+    array_mult = cfg.box_cluster_array[0] * cfg.box_cluster_array[1]
+    return array_refs * array_mult + (cfg.box_cluster_refs - array_refs)
+
+
+def _ref_instances_per_poly_cluster(cfg: FixturePreset) -> int:
+    array_refs = min(cfg.poly_cluster_refs, cfg.poly_cluster_refs // 2)
+    array_mult = cfg.poly_cluster_array[0] * cfg.poly_cluster_array[1]
+    return array_refs * array_mult + (cfg.poly_cluster_refs - array_refs)
+
+
+def fixture_manifest(path: str | Path, preset: str, scale: float = 1.0) -> FixtureManifest:
+    base = PRESETS[preset]
+    cfg = _scaled_preset(base, scale)
+
+    flattened_box_placements = (
+        cfg.box_wrappers
+        + cfg.box_clusters * _ref_instances_per_box_cluster(cfg)
+        + cfg.top_direct_box_refs * cfg.top_box_array[0] * cfg.top_box_array[1]
+        )
+    flattened_poly_placements = (
+        cfg.poly_wrappers
+        + cfg.poly_clusters * _ref_instances_per_poly_cluster(cfg)
+        + cfg.top_direct_poly_refs * cfg.top_poly_array[0] * cfg.top_poly_array[1]
+        )
+    polygon_layers = max(1, cfg.polygon_layers)
+    polys_per_layer = (cfg.poly_cells * cfg.polygons_per_cell) // polygon_layers
+
+    return FixtureManifest(
+        preset=cfg.name,
+        scale=scale,
+        gds_path=str(Path(path)),
+        library_name=f'masque-perf-{cfg.name}',
+        cells=cfg.box_cells + cfg.poly_cells + cfg.box_wrappers + cfg.poly_wrappers + cfg.box_clusters + cfg.poly_clusters + 1,
+        refs=(
+            cfg.box_wrappers
+            + cfg.poly_wrappers
+            + cfg.box_clusters * cfg.box_cluster_refs
+            + cfg.poly_clusters * cfg.poly_cluster_refs
+            + cfg.box_wrappers + cfg.poly_wrappers + cfg.box_clusters + cfg.poly_clusters
+            + cfg.top_direct_box_refs + cfg.top_direct_poly_refs
+            ),
+        layers=cfg.total_layers,
+        box_layers=cfg.box_layers,
+        heavy_box_layers=[[layer, 0] for layer in range(cfg.heavy_box_layers)],
+        polygon_layers=[[layer, 0] for layer in range(cfg.polygon_layers)],
+        hierarchical_boxes_per_heavy_layer=cfg.box_cells * cfg.heavy_boxes_per_cell,
+        hierarchical_boxes_per_regular_layer=cfg.box_cells * cfg.regular_boxes_per_cell,
+        hierarchical_polygons_total=cfg.poly_cells * cfg.polygons_per_cell,
+        hierarchical_paths_total=_poly_paths_total(cfg),
+        hierarchical_texts_total=_poly_texts_total(cfg),
+        flattened_box_placements=flattened_box_placements,
+        flattened_poly_placements=flattened_poly_placements,
+        estimated_flat_boxes_per_heavy_layer=flattened_box_placements * cfg.heavy_boxes_per_cell,
+        estimated_flat_polygons_per_active_polygon_layer=flattened_poly_placements * polys_per_layer // cfg.poly_cells if cfg.poly_cells else 0,
+        )
+
+
+def write_fixture(
+        path: str | Path,
+        *,
+        preset: str,
+        scale: float = 1.0,
+        write_manifest: bool = True,
+        ) -> FixtureManifest:
+    if preset not in PRESETS:
+        known = ', '.join(sorted(PRESETS))
+        raise KeyError(f'unknown preset {preset!r}; expected one of: {known}')
+
+    manifest = fixture_manifest(path, preset, scale)
+    cfg = _scaled_preset(PRESETS[preset], scale)
+    output = Path(path)
+    output.parent.mkdir(parents=True, exist_ok=True)
+
+    with output.open('wb') as stream:
+        header = klamath.library.FileHeader(
+            name=manifest.library_name.encode('ASCII'),
+            user_units_per_db_unit=USER_UNITS_PER_DB_UNIT,
+            meters_per_db_unit=METERS_PER_DB_UNIT,
+            )
+        header.write(stream)
+        _write_box_cells(stream, cfg)
+        _write_poly_cells(stream, cfg)
+        _write_wrappers(stream, cfg)
+        _write_box_clusters(stream, cfg)
+        _write_poly_clusters(stream, cfg)
+        _write_top(stream, cfg)
+        klamath.records.ENDLIB.write(stream, None)
+
+    if write_manifest:
+        manifest_path = output.with_suffix(output.suffix + '.json')
+        manifest_path.write_text(json.dumps(asdict(manifest), indent=2, sort_keys=True) + '\n')
+
+    return manifest
+
+
+def build_arg_parser() -> argparse.ArgumentParser:
+    parser = argparse.ArgumentParser(description='Generate synthetic GDS fixtures for GDS reader/writer performance work.')
+    parser.add_argument(
+        'preset',
+        nargs='?',
+        default='many_cells',
+        choices=sorted(PRESETS),
+        help='Fixture family to generate.',
+        )
+    parser.add_argument(
+        'output',
+        nargs='?',
+        help='Output .gds path. Defaults to build/gds_perf/<preset>.gds',
+        )
+    parser.add_argument(
+        '--scale',
+        type=float,
+        default=1.0,
+        help='Scale the preset counts down or up while keeping the same shape mix. Default: 1.0',
+        )
+    parser.add_argument(
+        '--no-manifest',
+        action='store_true',
+        help='Do not write the sidecar JSON manifest.',
+        )
+    return parser
+
+
+def main(argv: list[str] | None = None) -> int:
+    parser = build_arg_parser()
+    args = parser.parse_args(argv)
+    output = Path(args.output) if args.output is not None else Path('build/gds_perf') / f'{args.preset}.gds'
+    manifest = write_fixture(output, preset=args.preset, scale=args.scale, write_manifest=not args.no_manifest)
+    print(json.dumps(asdict(manifest), indent=2, sort_keys=True))
+    return 0
+
+
+if __name__ == '__main__':
+    raise SystemExit(main())

masque/file/svg.py

@@ -45,6 +45,10 @@ def _make_svg_ids(names: Mapping[str, Pattern]) -> dict[str, str]:
     return svg_ids
 
 
+def _detached_library(library: Mapping[str, Pattern]) -> dict[str, Pattern]:
+    return {name: pat.deepcopy() for name, pat in library.items()}
+
+
 def writefile(
         library: Mapping[str, Pattern],
         top: str,
@@ -53,13 +57,12 @@ def writefile(
         annotate_ports: bool = False,
         ) -> None:
     """
-    Write a Pattern to an SVG file, by first calling .polygonize() on it
+    Write a Pattern to an SVG file, by first calling .polygonize() on a detached
+     materialized copy
      to change the shapes into polygons, and then writing patterns as SVG
      groups (<g>, inside <defs>), polygons as paths (<path>), and refs
      as <use> elements.
 
-    Note that this function modifies the Pattern.
-
     If `custom_attributes` is `True`, a non-standard `pattern_layer` attribute
      is written to the relevant elements.
 
@@ -71,19 +74,21 @@ def writefile(
      prior to calling this function.
 
     Args:
-        pattern: Pattern to write to file. Modified by this function.
+        library: Mapping of pattern names to patterns.
+        top: Name of the top-level pattern to render.
         filename: Filename to write to.
         custom_attributes: Whether to write non-standard `pattern_layer` attribute to the
             SVG elements.
         annotate_ports: If True, draw an arrow for each port (similar to
             `Pattern.visualize(..., ports=True)`).
     """
-    pattern = library[top]
+    detached = _detached_library(library)
+    pattern = detached[top]
 
     # Polygonize pattern
     pattern.polygonize()
 
-    bounds = pattern.get_bounds(library=library)
+    bounds = pattern.get_bounds(library=detached)
     if bounds is None:
         bounds_min, bounds_max = numpy.array([[-1, -1], [1, 1]])
         logger.warning('Pattern had no bounds (empty?); setting arbitrary viewbox', stacklevel=1)
@@ -96,10 +101,10 @@ def writefile(
     # Create file
     svg = svgwrite.Drawing(filename, profile='full', viewBox=viewbox_string,
                            debug=(not custom_attributes))
-    svg_ids = _make_svg_ids(library)
+    svg_ids = _make_svg_ids(detached)
 
     # Now create a group for each pattern and add in any Boundary and Use elements
-    for name, pat in library.items():
+    for name, pat in detached.items():
         svg_group = svg.g(id=svg_ids[name], fill='blue', stroke='red')
 
         for layer, shapes in pat.shapes.items():
@@ -158,21 +163,21 @@ def writefile_inverted(
      box and drawing the polygons with reverse vertex order inside it, all within
      one `<path>` element.
 
-    Note that this function modifies the Pattern.
-
     If you want pattern polygonized with non-default arguments, just call `pattern.polygonize()`
      prior to calling this function.
 
     Args:
-        pattern: Pattern to write to file. Modified by this function.
+        library: Mapping of pattern names to patterns.
+        top: Name of the top-level pattern to render.
         filename: Filename to write to.
     """
-    pattern = library[top]
+    detached = _detached_library(library)
+    pattern = detached[top]
 
     # Polygonize and flatten pattern
-    pattern.polygonize().flatten(library)
+    pattern.polygonize().flatten(detached)
 
-    bounds = pattern.get_bounds(library=library)
+    bounds = pattern.get_bounds(library=detached)
     if bounds is None:
         bounds_min, bounds_max = numpy.array([[-1, -1], [1, 1]])
         logger.warning('Pattern had no bounds (empty?); setting arbitrary viewbox', stacklevel=1)

masque/label.py

@@ -53,6 +53,22 @@ class Label(PositionableImpl, RepeatableImpl, AnnotatableImpl, Bounded, Pivotabl
         self.repetition = repetition
         self.annotations = annotations if annotations is not None else {}
 
+    @classmethod
+    def _from_raw(
+            cls,
+            string: str,
+            *,
+            offset: NDArray[numpy.float64],
+            repetition: Repetition | None = None,
+            annotations: annotations_t | None = None,
+            ) -> Self:
+        new = cls.__new__(cls)
+        new._string = string
+        new._offset = offset
+        new._repetition = repetition
+        new._annotations = annotations
+        return new
+
     def __copy__(self) -> Self:
         return type(self)(
             string=self.string,

masque/library.py

@@ -14,20 +14,23 @@ Classes include:
 - `AbstractView`: Provides a way to use []-indexing to generate abstracts for patterns in the linked
     library. Generated with `ILibraryView.abstract_view()`.
 """
-from typing import Self, TYPE_CHECKING, cast, TypeAlias, Protocol, Literal
+from typing import Self, TYPE_CHECKING, Any, cast, TypeAlias, Protocol, Literal
-from collections.abc import Iterator, Mapping, MutableMapping, Sequence, Callable
+from collections.abc import Container, Iterator, Mapping, MutableMapping, Sequence, Callable
 import logging
 import re
 import copy
+from functools import wraps
 from pprint import pformat
 from collections import defaultdict
 from abc import ABCMeta, abstractmethod
+from contextvars import ContextVar
+from dataclasses import dataclass, replace
 from graphlib import TopologicalSorter, CycleError
 
 import numpy
 from numpy.typing import ArrayLike, NDArray
 
-from .error import LibraryError, PatternError
+from .error import BuildError, LibraryError, PatternError
 from .utils import layer_t, apply_transforms
 from .shapes import Shape, Polygon
 from .label import Label
@@ -40,6 +43,11 @@ if TYPE_CHECKING:
 
 logger = logging.getLogger(__name__)
 
+_ACTIVE_BUILD_SESSIONS: ContextVar[dict[int, '_BuildSessionLibrary'] | None] = ContextVar(
+    'masque_active_build_sessions',
+    default=None,
+)
+
 
 class visitor_function_t(Protocol):
     """ Signature for `Library.dfs()` visitor functions. """
@@ -63,6 +71,51 @@ dangling_mode_t: TypeAlias = Literal['error', 'ignore', 'include']
 """ How helpers should handle refs whose targets are not present in the library. """
 
 
+@dataclass(frozen=True)
+class CellProvenance:
+    """
+    Provenance record for one cell in a completed build output.
+
+    Each output name in a `BuildReport` maps to one `CellProvenance`. The
+    record captures both where the cell came from and how its visible name was
+    chosen.
+
+    Attributes:
+        requested_name: First name requested for this cell during the build.
+        kind: Whether the cell came from a declaration, helper emission, or an
+            imported source library.
+        owner_declared_name: Declared cell responsible for this output cell, if
+            any. Imported source cells leave this as `None`.
+        build_chain: Declared-cell dependency chain that was active when the
+            cell was emitted.
+    """
+    requested_name: str
+    kind: Literal['declared', 'helper', 'source']
+    owner_declared_name: str | None
+    build_chain: tuple[str, ...]
+
+
+@dataclass(frozen=True)
+class BuildReport:
+    """
+    Immutable summary of one `BuildLibrary.validate()` or `.build()` run.
+
+    The report is designed to answer two questions after a build completes:
+    which declared cells depended on which other declared cells, and where each
+    output cell came from.
+
+    Attributes:
+        requested_roots: Roots explicitly requested for the run. A full
+            `build()` uses all declared cells.
+        provenance: Mapping from final output name to provenance metadata.
+        dependency_graph: Declared-cell dependency graph discovered through
+            library-mediated reads and explicit recipe hints.
+    """
+    requested_roots: tuple[str, ...]
+    provenance: Mapping[str, CellProvenance]
+    dependency_graph: Mapping[str, frozenset[str]]
+
+
 SINGLE_USE_PREFIX = '_'
 """
 Names starting with this prefix are assumed to refer to single-use patterns,
@@ -96,6 +149,47 @@ def _rename_patterns(lib: 'ILibraryView', name: str) -> str:
     return lib.get_name(SINGLE_USE_PREFIX + stem)
 
 
+def _plan_source_names(
+        target: 'ILibraryView',
+        source_order: Sequence[str],
+        existing_names: Container[str],
+        *,
+        rename_theirs: Callable[['ILibraryView', str], str] | None = None,
+        rename_when: Literal['conflict', 'always'] = 'conflict',
+        ) -> dict[str, str]:
+    if rename_when not in ('conflict', 'always'):
+        raise ValueError(f'Unknown source rename mode: {rename_when!r}')
+    if rename_when == 'always' and rename_theirs is None:
+        raise TypeError('rename_theirs is required when rename_when="always"')
+
+    source_to_visible: dict[str, str] = {}
+    visible_names: set[str] = set()
+
+    for name in source_order:
+        visible = name
+        if rename_when == 'always':
+            assert rename_theirs is not None
+            visible = rename_theirs(target, name)
+        elif visible in existing_names or visible in visible_names:
+            if rename_theirs is None:
+                raise LibraryError(f'Conflicting name while adding source: {name!r}')
+            visible = rename_theirs(target, name)
+        if visible in existing_names or visible in visible_names:
+            raise LibraryError(f'Unresolved duplicate key encountered while adding source: {name!r} -> {visible!r}')
+        source_to_visible[name] = visible
+        visible_names.add(visible)
+
+    return source_to_visible
+
+
+def _source_rename_map(source_to_visible: Mapping[str, str]) -> dict[str, str]:
+    return {
+        source_name: visible_name
+        for source_name, visible_name in source_to_visible.items()
+        if source_name != visible_name
+        }
+
+
 class ILibraryView(Mapping[str, 'Pattern'], metaclass=ABCMeta):
     """
     Interface for a read-only library.
@@ -131,6 +225,15 @@ class ILibraryView(Mapping[str, 'Pattern'], metaclass=ABCMeta):
         """
         return Abstract(name=name, ports=self[name].ports)
 
+    def source_order(self) -> tuple[str, ...]:
+        """
+        Return names in the library's preferred source order.
+
+        Source-backed views may override this to preserve on-disk ordering
+        without materializing patterns.
+        """
+        return tuple(self.keys())
+
     def dangling_refs(
             self,
             tops: str | Sequence[str] | None = None,
@@ -519,12 +622,12 @@ class ILibraryView(Mapping[str, 'Pattern'], metaclass=ABCMeta):
 
                 for ref_transform in ref_transforms:
                     self.dfs(
-                        pattern=self[target],
+                        pattern = self[target],
-                        visit_before=visit_before,
+                        visit_before = visit_before,
-                        visit_after=visit_after,
+                        visit_after = visit_after,
-                        hierarchy=hierarchy + (target,),
+                        hierarchy = hierarchy + (target,),
-                        transform=ref_transform,
+                        transform = ref_transform,
-                        memo=memo,
+                        memo = memo,
                         )
 
         if visit_after is not None:
@@ -1388,6 +1491,678 @@ class Library(ILibrary):
         return tree, pat
 
 
+@dataclass
+class _BuildRecipe:
+    """ Captured deferred call to a pattern factory. """
+    func: Callable[..., 'Pattern']
+    args: tuple[Any, ...]
+    kwargs: dict[str, Any]
+    explicit_dependencies: tuple[str, ...] = ()
+
+    def depends_on(self, *names: str) -> '_BuildRecipe':
+        self.explicit_dependencies += tuple(names)
+        return self
+
+
+def cell(func: Callable[..., 'Pattern']) -> Callable[..., _BuildRecipe]:
+    """
+    Wrap a plain pattern factory so calls return deferred build recipes.
+
+    Use as either `cell(fn)(...)` or `@cell`.
+    """
+    @wraps(func)
+    def wrapper(*args: Any, **kwargs: Any) -> _BuildRecipe:
+        return _BuildRecipe(func=func, args=args, kwargs=kwargs)
+
+    return wrapper
+
+
+class BuildCellsView:
+    """
+    Attribute-based declaration namespace for `BuildLibrary`.
+
+    This is the ergonomic authoring surface exposed as `builder.cells`. It is
+    intentionally write-focused: attribute assignment and deletion register
+    declarations, while attribute reads fail with guidance to build first and
+    use the returned library.
+    """
+
+    def __init__(self, library: 'BuildLibrary') -> None:
+        object.__setattr__(self, '_library', library)
+
+    def __getattr__(self, name: str) -> 'Pattern':
+        raise BuildError(
+            f'BuildLibrary.cells.{name} is write-only during authoring. '
+            'Call build() and index the returned library instead.'
+        )
+
+    def __setattr__(self, name: str, value: 'Pattern | _BuildRecipe') -> None:
+        if name.startswith('_'):
+            object.__setattr__(self, name, value)
+            return
+        self._library[name] = value
+
+    def __delattr__(self, name: str) -> None:
+        if name.startswith('_'):
+            raise AttributeError(name)
+        del self._library[name]
+
+
+class BuildLibrary(ILibrary):
+    """
+    Two-phase declaration surface for mixed imported/generated libraries.
+
+    A `BuildLibrary` collects three kinds of inputs:
+    - direct declared `Pattern` objects
+    - deferred recipes created with `cell(...)`
+    - imported source-backed library views added with `add_source(...)`
+
+    The builder itself is not a normal readable library during authoring.
+    Instead, `validate()` and `build()` create a temporary build-session library
+    that recipes can read from and write helper cells into while dependencies
+    are resolved. `build()` then freezes the builder on success and returns the
+    built library plus a `BuildReport`.
+    """
+
+    def __init__(self) -> None:
+        self.cells = BuildCellsView(self)
+        self._frozen = False
+        self._declarations: dict[str, Pattern | _BuildRecipe] = {}
+        self._sources: list[tuple[ILibraryView, dict[str, str]]] = []
+        self._names: dict[str, None] = {}
+
+    def _active_session(self) -> '_BuildSessionLibrary | None':
+        sessions = _ACTIVE_BUILD_SESSIONS.get()
+        if sessions is None:
+            return None
+        return sessions.get(id(self))
+
+    def _require_active_session(self, operation: str) -> '_BuildSessionLibrary':
+        session = self._active_session()
+        if session is None:
+            raise BuildError(
+                f'BuildLibrary.{operation}() is only available while validate() or build() is running. '
+                'Use the built output library for reads.'
+                )
+        return session
+
+    def _assert_editable(self) -> None:
+        if self._frozen:
+            raise BuildError('This BuildLibrary has already been built successfully and is now frozen.')
+
+    def __iter__(self) -> Iterator[str]:
+        session = self._active_session()
+        if session is not None:
+            return iter(session)
+        return iter(self._names)
+
+    def __len__(self) -> int:
+        session = self._active_session()
+        if session is not None:
+            return len(session)
+        return len(self._names)
+
+    def __contains__(self, key: object) -> bool:
+        session = self._active_session()
+        if session is not None:
+            return key in session
+        return key in self._names
+
+    def __getitem__(self, key: str) -> 'Pattern':
+        return self._require_active_session('__getitem__')[key]
+
+    def __setitem__(
+            self,
+            key: str,
+            value: 'Pattern | _BuildRecipe',
+            ) -> None:
+        session = self._active_session()
+        if session is not None:
+            session[key] = value
+            return
+
+        self._assert_editable()
+        if key in self._names:
+            raise LibraryError(f'"{key}" already exists in the builder. Overwriting is not allowed!')
+
+        if isinstance(value, _BuildRecipe):
+            declaration = value
+        else:
+            if callable(value):
+                raise TypeError('BuildLibrary recipes must be wrapped with cell(fn)(...) or @cell.')
+            declaration = value
+
+        self._declarations[key] = declaration
+        self._names[key] = None
+
+    def __delitem__(self, key: str) -> None:
+        session = self._active_session()
+        if session is not None:
+            del session[key]
+            return
+
+        self._assert_editable()
+        if key not in self._declarations:
+            raise KeyError(key)
+        del self._declarations[key]
+        del self._names[key]
+
+    def _merge(self, key_self: str, other: Mapping[str, 'Pattern'], key_other: str) -> None:
+        session = self._active_session()
+        if session is not None:
+            session._merge(key_self, other, key_other)
+            return
+        self[key_self] = copy.deepcopy(other[key_other])
+
+    def add(
+            self,
+            other: Mapping[str, 'Pattern'],
+            rename_theirs: Callable[['ILibraryView', str], str] = _rename_patterns,
+            mutate_other: bool = False,
+            ) -> dict[str, str]:
+        from .pattern import map_targets        # noqa: PLC0415
+
+        session = self._active_session()
+        if session is not None:
+            return session.add(other, rename_theirs=rename_theirs, mutate_other=mutate_other)
+
+        self._assert_editable()
+
+        source_backed = isinstance(other, ILibraryView) and not isinstance(other, Library | LibraryView)
+        if source_backed:
+            if mutate_other:
+                raise BuildError('BuildLibrary.add(..., mutate_other=True) is not supported for source-backed inputs.')
+            return self.add_source(
+                other,
+                rename_theirs = rename_theirs,
+                rename_when = 'conflict',
+                )
+
+        source_order = tuple(other.keys())
+        source_to_visible = _plan_source_names(
+            self,
+            source_order,
+            self._names,
+            rename_theirs = rename_theirs,
+            rename_when = 'conflict',
+            )
+        rename_map = _source_rename_map(source_to_visible)
+
+        if mutate_other:
+            temp = other
+        else:
+            temp = Library(copy.deepcopy(dict(other)))
+
+        for source_name in source_order:
+            visible_name = source_to_visible[source_name]
+            pattern = temp[source_name]
+            if rename_map:
+                pattern.refs = map_targets(
+                    pattern.refs,
+                    lambda target: cast('dict[str | None, str | None]', rename_map).get(target, target),
+                    )
+            self[visible_name] = pattern
+
+        return rename_map
+
+    def __lshift__(self, other: TreeView) -> str:
+        session = self._active_session()
+        if session is not None:
+            return session << other
+
+        self._assert_editable()
+        if len(other) == 1:
+            name = next(iter(other))
+        elif isinstance(other, ILibraryView) and not isinstance(other, Library | LibraryView):
+            source_order = other.source_order()
+            child_graph = other.child_graph(dangling='include')
+            referenced = set().union(*child_graph.values()) if child_graph else set()
+            tops = [candidate for candidate in source_order if candidate not in referenced]
+            if len(tops) != 1:
+                raise LibraryError(f'Asked for the single topcell, but found the following: {pformat(tops)}')
+            name = tops[0]
+        else:
+            return super().__lshift__(other)
+
+        rename_map = self.add(other)
+        return rename_map.get(name, name)
+
+    def __le__(self, other: Mapping[str, 'Pattern']) -> Abstract:
+        if self._active_session() is not None:
+            return super().__le__(other)
+        raise BuildError('BuildLibrary.__le__() is only available while validate() or build() is running.')
+
+    def rename(
+            self,
+            old_name: str,
+            new_name: str,
+            move_references: bool = False,
+            ) -> Self:
+        """
+        Rename a helper cell during an active build session.
+
+        During authoring, declared cells must be registered under their
+        intended final names and imported source cells must be renamed through
+        `add_source(...)`.
+        """
+        session = self._active_session()
+        if session is not None:
+            session.rename(old_name, new_name, move_references=move_references)
+            return self
+
+        self._assert_editable()
+        if old_name == new_name:
+            return self
+        if old_name in self._declarations:
+            raise BuildError(
+                f'Cannot rename declared build cell "{old_name}" during authoring. '
+                'Register it under the intended final name instead.'
+                )
+        if old_name not in self._names:
+            raise LibraryError(f'"{old_name}" does not exist in the builder.')
+        raise BuildError(
+            f'Cannot rename imported source cell "{old_name}" during authoring. '
+            'Choose visible source names with add_source(..., rename_theirs=..., rename_when=...).'
+            )
+
+    def abstract(self, name: str) -> Abstract:
+        return self._require_active_session('abstract').abstract(name)
+
+    def resolve(
+            self,
+            other: 'Abstract | str | Pattern | TreeView',
+            append: bool = False,
+            ) -> 'Abstract | Pattern':
+        return self._require_active_session('resolve').resolve(other, append=append)
+
+    def add_source(
+            self,
+            source: Mapping[str, 'Pattern'] | ILibraryView,
+            *,
+            rename_theirs: Callable[[ILibraryView, str], str] | None = None,
+            rename_when: Literal['conflict', 'always'] = 'conflict',
+            ) -> dict[str, str]:
+        """
+        Register an imported source-backed library with the builder.
+
+        The source is not materialized immediately. Its names are scanned once
+        to reserve visible builder names, then the source is read again when a
+        build session starts. The source's cell membership must not be
+        structurally mutated between `add_source()` and `build()`/`validate()`.
+        Source cells may be renamed on entry to avoid collisions with existing
+        declarations or other imported sources.
+
+        Args:
+            rename_theirs: Function used to choose visible names for imported
+                source cells.
+            rename_when: If `'conflict'`, only conflicting names are renamed.
+                If `'always'`, every imported source name is passed through
+                `rename_theirs`.
+
+        Returns:
+            Mapping of `{source_name: visible_name}` for imported names that
+            were renamed while being added.
+        """
+        if self._active_session() is not None:
+            raise BuildError('BuildLibrary.add_source() is only available while authoring, not during validate() or build().')
+        self._assert_editable()
+
+        view = source if isinstance(source, ILibraryView) else LibraryView(source)
+        source_order = tuple(view.source_order())
+        source_to_visible = _plan_source_names(
+            self,
+            source_order,
+            self._names,
+            rename_theirs = rename_theirs,
+            rename_when = rename_when,
+            )
+
+        self._sources.append((view, dict(source_to_visible)))
+        for source_name in source_order:
+            visible = source_to_visible[source_name]
+            self._names[visible] = None
+        return _source_rename_map(source_to_visible)
+
+    def validate(
+            self,
+            names: Sequence[str] | None = None,
+            *,
+            allow_dangling: bool = False,
+            ) -> BuildReport:
+        """
+        Run the full build logic and return a `BuildReport` without producing output.
+
+        This is a dry run over the same dependency resolution and recipe
+        execution path used by `build()`. Any generated library is discarded
+        after validation completes.
+        """
+        _session, report = self._run_build(names=names, allow_dangling=allow_dangling)
+        return report
+
+    def build(
+            self,
+            *,
+            output: Literal['overlay', 'library'] = 'overlay',
+            allow_dangling: bool = False,
+            ) -> tuple[ILibrary, BuildReport]:
+        """
+        Materialize declarations and return a usable output library plus report.
+
+        Args:
+            output: `'overlay'` preserves imported source-backed cells where
+                possible, while `'library'` eagerly materializes the full
+                result.
+            allow_dangling: If `False`, fail the build when the completed
+                library still contains dangling references.
+        """
+        if output not in ('overlay', 'library'):
+            raise ValueError(f'Unknown build output mode: {output!r}')
+        self._assert_editable()
+        session, report = self._run_build(names=None, allow_dangling=allow_dangling)
+        if output == 'library':
+            built_output = session.to_library()
+        else:
+            built_output = session.to_overlay()
+        self._frozen = True
+        return built_output, report
+
+    def _run_build(
+            self,
+            *,
+            names: Sequence[str] | None,
+            allow_dangling: bool,
+            ) -> tuple['_BuildSessionLibrary', BuildReport]:
+        roots = tuple(dict.fromkeys(names if names is not None else self._declarations.keys()))
+        unknown = [name for name in roots if name not in self._names]
+        if unknown:
+            raise BuildError(f'Unknown build roots requested: {unknown}')
+
+        session = _BuildSessionLibrary(self)
+        sessions = dict(_ACTIVE_BUILD_SESSIONS.get() or {})
+        sessions[id(self)] = session
+        token = _ACTIVE_BUILD_SESSIONS.set(sessions)
+        try:
+            session.materialize_many(roots)
+            if not allow_dangling:
+                session.child_graph(dangling='error')
+        finally:
+            _ACTIVE_BUILD_SESSIONS.reset(token)
+
+        report = session.build_report(roots)
+        return session, report
+
+
+class _BuildSessionLibrary(ILibrary):
+    """
+    Internal overlay-backed library used while a `BuildLibrary` is executing.
+
+    This object provides the mutable-library surface that recipes expect while
+    also tracking declared-cell dependencies, helper-cell provenance, and
+    imported source cells. It exists only for the duration of a validation or
+    build run.
+    """
+
+    def __init__(self, builder: BuildLibrary) -> None:
+        from .file.gdsii_lazy_core import OverlayLibrary      # noqa: PLC0415
+
+        self._builder = builder
+        self._overlay = OverlayLibrary()
+        self._built: set[str] = set()
+        self._declared_stack: list[str] = []
+        self._names = dict(builder._names)
+        self._provenance: dict[str, CellProvenance] = {}
+        self._dependency_graph: defaultdict[str, set[str]] = defaultdict(set)
+        self._install_sources()
+
+    def _install_sources(self) -> None:
+        for source_library, source_to_visible in self._builder._sources:
+            source_order = source_library.source_order()
+            expected_names = set(source_to_visible)
+            actual_names = set(source_order)
+            if actual_names != expected_names:
+                added_names = sorted(actual_names - expected_names)
+                removed_names = sorted(expected_names - actual_names)
+                detail = []
+                if added_names:
+                    detail.append(f'added={added_names}')
+                if removed_names:
+                    detail.append(f'removed={removed_names}')
+                raise BuildError(
+                    'Imported source library changed after add_source() was called '
+                    f'({", ".join(detail)}). '
+                    'Do not structurally mutate source libraries between add_source() and build()/validate().'
+                    )
+
+            def rename_source(_lib: ILibraryView, name: str, *, mapping: Mapping[str, str] = source_to_visible) -> str:
+                return mapping[name]
+
+            self._overlay.add_source(
+                source_library,
+                rename_theirs = rename_source,
+                rename_when = 'always',
+            )
+
+            for source_name in source_order:
+                visible_name = source_to_visible[source_name]
+                self._provenance[visible_name] = CellProvenance(
+                    requested_name = source_name,
+                    kind = 'source',
+                    owner_declared_name = None,
+                    build_chain = (),
+                    )
+
+    def __iter__(self) -> Iterator[str]:
+        return iter(self._names)
+
+    def __len__(self) -> int:
+        return len(self._names)
+
+    def __contains__(self, key: object) -> bool:
+        return key in self._names
+
+    def _current_declared(self) -> str | None:
+        if not self._declared_stack:
+            return None
+        return self._declared_stack[-1]
+
+    def _record_dependency(self, target: str) -> None:
+        current = self._current_declared()
+        if current is None or current == target or target not in self._builder._declarations:
+            return
+        self._dependency_graph[current].add(target)
+
+    def _guard_mutable_output_name(self, key: str, *, operation: str) -> None:
+        if key in self._builder._declarations:
+            raise BuildError(f'Cannot {operation} declared build cell "{key}" during an active build session.')
+
+        provenance = self._provenance.get(key)
+        if provenance is not None and provenance.kind == 'source':
+            raise BuildError(f'Cannot {operation} imported source cell "{key}" during an active build session.')
+
+    def rename(
+            self,
+            old_name: str,
+            new_name: str,
+            move_references: bool = False,
+            ) -> Self:
+        if old_name == new_name:
+            return self
+        if old_name not in self._overlay:
+            if old_name in self._builder._declarations:
+                self._guard_mutable_output_name(old_name, operation='rename')
+            raise LibraryError(f'"{old_name}" does not exist in the library.')
+
+        self._guard_mutable_output_name(old_name, operation='rename')
+        if new_name in self._names:
+            raise LibraryError(f'"{new_name}" already exists in the library.')
+
+        self._overlay.rename(old_name, new_name, move_references=move_references)
+        self._names = {
+            new_name if name == old_name else name: None
+            for name in self._names
+            }
+
+        provenance = self._provenance.pop(old_name)
+        self._provenance[new_name] = provenance
+        return self
+
+    def __getitem__(self, key: str) -> 'Pattern':
+        if key in self._builder._declarations:
+            self._record_dependency(key)
+            self._ensure_declared(key)
+        return self._overlay[key]
+
+    def __setitem__(
+            self,
+            key: str,
+            value: 'Pattern | Callable[[], Pattern]',
+            ) -> None:
+        if key in self._overlay:
+            raise LibraryError(f'"{key}" already exists in the library. Overwriting is not allowed!')
+        current = self._current_declared()
+        if key in self._builder._declarations and key != current:
+            raise LibraryError(f'"{key}" is reserved for a declared cell and cannot be used as a helper name.')
+
+        pattern = value() if callable(value) else value
+        self._overlay[key] = pattern
+        self._names.setdefault(key, None)
+
+        kind: Literal['declared', 'helper']
+        if current is not None and key == current:
+            kind = 'declared'
+        else:
+            kind = 'helper'
+
+        self._provenance[key] = CellProvenance(
+            requested_name = key,
+            kind = kind,
+            owner_declared_name = current if kind == 'helper' else key,
+            build_chain = tuple(self._declared_stack),
+            )
+
+    def __delitem__(self, key: str) -> None:
+        if key not in self._overlay:
+            if key in self._builder._declarations:
+                self._guard_mutable_output_name(key, operation='delete')
+            raise KeyError(key)
+
+        self._guard_mutable_output_name(key, operation='delete')
+        if key in self._overlay:
+            del self._overlay[key]
+        self._names.pop(key, None)
+        self._provenance.pop(key, None)
+
+    def _merge(self, key_self: str, other: Mapping[str, 'Pattern'], key_other: str) -> None:
+        self[key_self] = copy.deepcopy(other[key_other])
+
+    def add(
+            self,
+            other: Mapping[str, 'Pattern'],
+            rename_theirs: Callable[['ILibraryView', str], str] = _rename_patterns,
+            mutate_other: bool = False,
+            ) -> dict[str, str]:
+        rename_map = super().add(other, rename_theirs=rename_theirs, mutate_other=mutate_other)
+
+        current = self._current_declared()
+        for old_name, new_name in rename_map.items():
+            if new_name in self._provenance:
+                self._provenance[new_name] = replace(
+                    self._provenance[new_name],
+                    requested_name = old_name,
+                    owner_declared_name = current if current is not None else self._provenance[new_name].owner_declared_name,
+                    )
+        return rename_map
+
+    def _wrap_error(self, name: str, exc: Exception) -> BuildError:
+        chain = tuple(self._declared_stack)
+        msg = [f'Failed while building declared cell "{name}"']
+        if chain:
+            msg.append(f'Dependency chain: {" -> ".join(chain)}')
+        msg.append(f'Cause: {exc}')
+        return BuildError('\n'.join(msg))
+
+    def _ensure_named(self, name: str) -> None:
+        if name in self._builder._declarations:
+            self._record_dependency(name)
+            self._ensure_declared(name)
+            return
+        if name in self._overlay:
+            return
+        raise BuildError(f'Missing dependency "{name}"')
+
+    def _ensure_declared(self, name: str) -> None:
+        from .pattern import Pattern        # noqa: PLC0415
+
+        if name in self._built:
+            return
+        if name in self._declared_stack:
+            chain = ' -> '.join(self._declared_stack + [name])
+            raise BuildError(f'Cycle detected while building declared cells: {chain}')
+
+        declaration = self._builder._declarations[name]
+        self._declared_stack.append(name)
+        try:
+            if isinstance(declaration, _BuildRecipe):
+                for dep in declaration.explicit_dependencies:
+                    self._ensure_named(dep)
+                pattern = declaration.func(*declaration.args, **declaration.kwargs)
+                if not isinstance(pattern, Pattern):
+                    raise BuildError(f'Recipe for "{name}" returned {type(pattern).__name__}, expected Pattern')
+            else:
+                pattern = declaration.deepcopy()
+
+            if name in self._overlay:
+                if self._overlay[name] is not pattern:
+                    raise BuildError(
+                        f'Recipe for "{name}" wrote a different pattern into the session under its own name.'
+                        )
+            else:
+                self[name] = pattern
+            self._built.add(name)
+        except Exception as exc:
+            raise self._wrap_error(name, exc) from exc
+        finally:
+            self._declared_stack.pop()
+
+    def materialize_many(self, names: Sequence[str]) -> None:
+        for name in dict.fromkeys(names):
+            self._ensure_named(name)
+
+    def source_order(self) -> tuple[str, ...]:
+        return self._overlay.source_order()
+
+    def child_graph(
+            self,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[str, set[str]]:
+        return self._overlay.child_graph(dangling=dangling)
+
+    def parent_graph(
+            self,
+            dangling: dangling_mode_t = 'error',
+            ) -> dict[str, set[str]]:
+        return self._overlay.parent_graph(dangling=dangling)
+
+    def build_report(self, requested_roots: Sequence[str]) -> BuildReport:
+        dependency_graph = {
+            name: frozenset(self._dependency_graph.get(name, set()))
+            for name in self._builder._declarations
+            if name in self._dependency_graph or name in requested_roots
+            }
+        return BuildReport(
+            requested_roots = tuple(dict.fromkeys(requested_roots)),
+            provenance = dict(self._provenance),
+            dependency_graph = dependency_graph,
+            )
+
+    def to_overlay(self) -> ILibrary:
+        return self._overlay
+
+    def to_library(self) -> Library:
+        mapping = {name: self._overlay[name] for name in self._overlay.source_order()}
+        return Library(mapping)
+
+
 class LazyLibrary(ILibrary):
     """
     This class is usually used to create a library of Patterns by mapping names to

masque/ref.py

@@ -86,6 +86,26 @@ class Ref(
         self.repetition = repetition
         self.annotations = annotations if annotations is not None else {}
 
+    @classmethod
+    def _from_raw(
+            cls,
+            *,
+            offset: NDArray[numpy.float64],
+            rotation: float,
+            mirrored: bool,
+            scale: float,
+            repetition: Repetition | None,
+            annotations: annotations_t | None,
+            ) -> Self:
+        new = cls.__new__(cls)
+        new._offset = offset
+        new._rotation = rotation % (2 * pi)
+        new._scale = scale
+        new._mirrored = mirrored
+        new._repetition = repetition
+        new._annotations = annotations
+        return new
+
     def __copy__(self) -> 'Ref':
         new = Ref(
             offset=self.offset.copy(),

masque/repetition.py

@@ -113,6 +113,22 @@ class Grid(Repetition):
         self.a_count = a_count
         self.b_count = b_count
 
+    @classmethod
+    def _from_raw(
+            cls: type[GG],
+            *,
+            a_vector: NDArray[numpy.float64],
+            a_count: int,
+            b_vector: NDArray[numpy.float64],
+            b_count: int,
+            ) -> GG:
+        new = cls.__new__(cls)
+        new._a_vector = a_vector
+        new._b_vector = b_vector
+        new._a_count = int(a_count)
+        new._b_count = int(b_count)
+        return new
+
     @classmethod
     def aligned(
             cls: type[GG],

masque/shapes/__init__.py

@@ -11,6 +11,7 @@ from .shape import (
 
 from .polygon import Polygon as Polygon
 from .poly_collection import PolyCollection as PolyCollection
+from .rect_collection import RectCollection as RectCollection
 from .circle import Circle as Circle
 from .ellipse import Ellipse as Ellipse
 from .arc import Arc as Arc

masque/shapes/arc.py

@@ -197,29 +197,38 @@ class Arc(PositionableImpl, Shape):
             repetition: Repetition | None = None,
             annotations: annotations_t = None,
             angle_ref: ArcAngleRef | str = ArcAngleRef.Center,
-            raw: bool = False,
             ) -> None:
-        if raw:
+        self.radii = radii
-            assert isinstance(radii, numpy.ndarray)
+        self.angles = angles
-            assert isinstance(angles, numpy.ndarray)
+        self.width = width
-            assert isinstance(offset, numpy.ndarray)
+        self.offset = offset
-            self._radii = radii
+        self.rotation = rotation
-            self._angles = angles
+        self.angle_ref = angle_ref
-            self._width = width
+        self.repetition = repetition
-            self._offset = offset
+        self.annotations = annotations
-            self._rotation = rotation
+
-            self._angle_ref = ArcAngleRef(angle_ref)
+    @classmethod
-            self._repetition = repetition
+    def _from_raw(
-            self._annotations = annotations
+            cls,
-        else:
+            *,
-            self.radii = radii
+            radii: NDArray[numpy.float64],
-            self.angles = angles
+            angles: NDArray[numpy.float64],
-            self.width = width
+            width: float,
-            self.offset = offset
+            offset: NDArray[numpy.float64],
-            self.rotation = rotation
+            rotation: float,
-            self.angle_ref = angle_ref
+            annotations: annotations_t = None,
-            self.repetition = repetition
+            repetition: Repetition | None = None,
-            self.annotations = annotations
+            ) -> 'Arc':
+        new = cls.__new__(cls)
+        new._radii = radii
+        new._angles = angles
+        new._width = width
+        new._offset = offset
+        new._rotation = rotation % (2 * pi)
+        new._angle_ref = ArcAngleRef(angle_ref)
+        new._repetition = repetition
+        new._annotations = annotations
+        return new
 
     def __deepcopy__(self, memo: dict | None = None) -> 'Arc':
         memo = {} if memo is None else memo

masque/shapes/circle.py

@@ -50,19 +50,27 @@ class Circle(PositionableImpl, Shape):
             offset: ArrayLike = (0.0, 0.0),
             repetition: Repetition | None = None,
             annotations: annotations_t = None,
-            raw: bool = False,
             ) -> None:
-        if raw:
+        self.radius = radius
-            assert isinstance(offset, numpy.ndarray)
+        self.offset = offset
-            self._radius = radius
+        self.repetition = repetition
-            self._offset = offset
+        self.annotations = annotations
-            self._repetition = repetition
+
-            self._annotations = annotations
+    @classmethod
-        else:
+    def _from_raw(
-            self.radius = radius
+            cls,
-            self.offset = offset
+            *,
-            self.repetition = repetition
+            radius: float,
-            self.annotations = annotations
+            offset: NDArray[numpy.float64],
+            annotations: annotations_t = None,
+            repetition: Repetition | None = None,
+            ) -> 'Circle':
+        new = cls.__new__(cls)
+        new._radius = radius
+        new._offset = offset
+        new._repetition = repetition
+        new._annotations = annotations
+        return new
 
     def __deepcopy__(self, memo: dict | None = None) -> 'Circle':
         memo = {} if memo is None else memo

masque/shapes/ellipse.py

@@ -95,22 +95,30 @@ class Ellipse(PositionableImpl, Shape):
             rotation: float = 0,
             repetition: Repetition | None = None,
             annotations: annotations_t = None,
-            raw: bool = False,
             ) -> None:
-        if raw:
+        self.radii = radii
-            assert isinstance(radii, numpy.ndarray)
+        self.offset = offset
-            assert isinstance(offset, numpy.ndarray)
+        self.rotation = rotation
-            self._radii = radii
+        self.repetition = repetition
-            self._offset = offset
+        self.annotations = annotations
-            self._rotation = rotation
+
-            self._repetition = repetition
+    @classmethod
-            self._annotations = annotations
+    def _from_raw(
-        else:
+            cls,
-            self.radii = radii
+            *,
-            self.offset = offset
+            radii: NDArray[numpy.float64],
-            self.rotation = rotation
+            offset: NDArray[numpy.float64],
-            self.repetition = repetition
+            rotation: float,
-            self.annotations = annotations
+            annotations: annotations_t = None,
+            repetition: Repetition | None = None,
+            ) -> Self:
+        new = cls.__new__(cls)
+        new._radii = radii
+        new._offset = offset
+        new._rotation = rotation % pi
+        new._repetition = repetition
+        new._annotations = annotations
+        return new
 
     def __deepcopy__(self, memo: dict | None = None) -> Self:
         memo = {} if memo is None else memo

masque/shapes/path.py

@@ -201,34 +201,43 @@ class Path(Shape):
             rotation: float = 0,
             repetition: Repetition | None = None,
             annotations: annotations_t = None,
-            raw: bool = False,
             ) -> None:
         self._cap_extensions = None     # Since .cap setter might access it
 
-        if raw:
+        self.vertices = vertices
-            assert isinstance(vertices, numpy.ndarray)
+        self.repetition = repetition
-            assert isinstance(cap_extensions, numpy.ndarray) or cap_extensions is None
+        self.annotations = annotations
-            self._vertices = vertices
+        self._cap = cap
-            self._repetition = repetition
+        if cap == PathCap.SquareCustom and cap_extensions is None:
-            self._annotations = annotations
+            self._cap_extensions = numpy.zeros(2)
-            self._width = width
-            self._cap = cap
-            self._cap_extensions = cap_extensions
         else:
-            self.vertices = vertices
+            self.cap_extensions = cap_extensions
-            self.repetition = repetition
+        self.width = width
-            self.annotations = annotations
-            self._cap = cap
-            if cap == PathCap.SquareCustom and cap_extensions is None:
-                self._cap_extensions = numpy.zeros(2)
-            else:
-                self.cap_extensions = cap_extensions
-            self.width = width
         if rotation:
             self.rotate(rotation)
         if numpy.any(offset):
             self.translate(offset)
 
+    @classmethod
+    def _from_raw(
+            cls,
+            *,
+            vertices: NDArray[numpy.float64],
+            width: float,
+            cap: PathCap,
+            cap_extensions: NDArray[numpy.float64] | None = None,
+            annotations: annotations_t = None,
+            repetition: Repetition | None = None,
+            ) -> Self:
+        new = cls.__new__(cls)
+        new._vertices = vertices
+        new._width = width
+        new._cap = cap
+        new._cap_extensions = cap_extensions
+        new._repetition = repetition
+        new._annotations = annotations
+        return new
+
     def __deepcopy__(self, memo: dict | None = None) -> 'Path':
         memo = {} if memo is None else memo
         new = copy.copy(self)

masque/shapes/poly_collection.py

@@ -34,7 +34,7 @@ class PolyCollection(Shape):
     _vertex_lists: NDArray[numpy.float64]
     """ 2D NDArray ((N+M+...) x 2)  of vertices `[[xa0, ya0], [xa1, ya1], ..., [xb0, yb0], [xb1, yb1], ... ]` """
 
-    _vertex_offsets: NDArray[numpy.intp]
+    _vertex_offsets: NDArray[numpy.integer[Any]]
     """ 1D NDArray specifying the starting offset for each polygon """
 
     @property
@@ -45,7 +45,7 @@ class PolyCollection(Shape):
         return self._vertex_lists
 
     @property
-    def vertex_offsets(self) -> NDArray[numpy.intp]:
+    def vertex_offsets(self) -> NDArray[numpy.integer[Any]]:
         """
         Starting offset (in `vertex_lists`) for each polygon
         """
@@ -63,7 +63,7 @@ class PolyCollection(Shape):
                 chain(self._vertex_offsets[1:], [self._vertex_lists.shape[0]]),
                 strict=True,
                 ):
-            yield slice(ii, ff)
+            yield slice(int(ii), int(ff))
 
     @property
     def polygon_vertices(self) -> Iterator[NDArray[numpy.float64]]:
@@ -100,25 +100,32 @@ class PolyCollection(Shape):
             rotation: float = 0.0,
             repetition: Repetition | None = None,
             annotations: annotations_t = None,
-            raw: bool = False,
             ) -> None:
-        if raw:
+        self._vertex_lists = numpy.asarray(vertex_lists, dtype=float)
-            assert isinstance(vertex_lists, numpy.ndarray)
+        self._vertex_offsets = numpy.asarray(vertex_offsets, dtype=numpy.intp)
-            assert isinstance(vertex_offsets, numpy.ndarray)
+        self.repetition = repetition
-            self._vertex_lists = vertex_lists
+        self.annotations = annotations
-            self._vertex_offsets = vertex_offsets
-            self._repetition = repetition
-            self._annotations = annotations
-        else:
-            self._vertex_lists = numpy.asarray(vertex_lists, dtype=float)
-            self._vertex_offsets = numpy.asarray(vertex_offsets, dtype=numpy.intp)
-            self.repetition = repetition
-            self.annotations = annotations
         if rotation:
             self.rotate(rotation)
         if numpy.any(offset):
             self.translate(offset)
 
+    @classmethod
+    def _from_raw(
+            cls,
+            *,
+            vertex_lists: NDArray[numpy.float64],
+            vertex_offsets: NDArray[numpy.integer[Any]],
+            annotations: annotations_t = None,
+            repetition: Repetition | None = None,
+            ) -> Self:
+        new = cls.__new__(cls)
+        new._vertex_lists = vertex_lists
+        new._vertex_offsets = vertex_offsets
+        new._repetition = repetition
+        new._annotations = annotations
+        return new
+
     def __deepcopy__(self, memo: dict | None = None) -> Self:
         memo = {} if memo is None else memo
         new = copy.copy(self)
@@ -132,7 +139,7 @@ class PolyCollection(Shape):
         return (
             type(self) is type(other)
             and numpy.array_equal(self._vertex_lists, other._vertex_lists)
-            and numpy.array_equal(self._vertex_offsets, other._vertex_offsets)
+            and numpy.array_equal(self.vertex_offsets, other.vertex_offsets)
             and self.repetition == other.repetition
             and annotations_eq(self.annotations, other.annotations)
             )
@@ -215,11 +222,11 @@ class PolyCollection(Shape):
 
         # TODO: normalize mirroring?
 
-        return ((type(self), rotated_vertices.data.tobytes() + self._vertex_offsets.tobytes()),
+        return ((type(self), rotated_vertices.data.tobytes() + self.vertex_offsets.tobytes()),
                 (offset, scale / norm_value, rotation, False),
                 lambda: PolyCollection(
                     vertex_lists=rotated_vertices * norm_value,
-                    vertex_offsets=self._vertex_offsets.copy(),
+                    vertex_offsets=self.vertex_offsets.copy(),
                     ),
                 )
 

masque/shapes/polygon.py

@@ -115,22 +115,29 @@ class Polygon(Shape):
             rotation: float = 0.0,
             repetition: Repetition | None = None,
             annotations: annotations_t = None,
-            raw: bool = False,
             ) -> None:
-        if raw:
+        self.vertices = vertices
-            assert isinstance(vertices, numpy.ndarray)
+        self.repetition = repetition
-            self._vertices = vertices
+        self.annotations = annotations
-            self._repetition = repetition
-            self._annotations = annotations
-        else:
-            self.vertices = vertices
-            self.repetition = repetition
-            self.annotations = annotations
         if rotation:
             self.rotate(rotation)
         if numpy.any(offset):
             self.translate(offset)
 
+    @classmethod
+    def _from_raw(
+            cls,
+            *,
+            vertices: NDArray[numpy.float64],
+            annotations: annotations_t = None,
+            repetition: Repetition | None = None,
+            ) -> Self:
+        new = cls.__new__(cls)
+        new._vertices = vertices
+        new._repetition = repetition
+        new._annotations = annotations
+        return new
+
     def __deepcopy__(self, memo: dict | None = None) -> 'Polygon':
         memo = {} if memo is None else memo
         new = copy.copy(self)

masque/shapes/rect_collection.py

@@ -0,0 +1,249 @@
+from typing import Any, cast, Self
+from collections.abc import Iterator
+import copy
+import functools
+
+import numpy
+from numpy import pi
+from numpy.typing import NDArray, ArrayLike
+
+from . import Shape, normalized_shape_tuple
+from .polygon import Polygon
+from ..error import PatternError
+from ..repetition import Repetition
+from ..utils import annotations_lt, annotations_eq, rep2key, annotations_t
+
+
+def _normalize_rects(rects: ArrayLike) -> NDArray[numpy.float64]:
+    arr = numpy.asarray(rects, dtype=float)
+    if arr.ndim != 2 or arr.shape[1] != 4:
+        raise PatternError('Rectangles must be an Nx4 array of [xmin, ymin, xmax, ymax]')
+    if numpy.any(arr[:, 0] > arr[:, 2]) or numpy.any(arr[:, 1] > arr[:, 3]):
+        raise PatternError('Rectangles must satisfy xmin <= xmax and ymin <= ymax')
+    if arr.shape[0] <= 1:
+        return arr
+    order = numpy.lexsort((arr[:, 3], arr[:, 2], arr[:, 1], arr[:, 0]))
+    return arr[order]
+
+
+def _renormalize_rects_in_place(rects: NDArray[numpy.float64]) -> None:
+    x0 = numpy.minimum(rects[:, 0], rects[:, 2])
+    x1 = numpy.maximum(rects[:, 0], rects[:, 2])
+    y0 = numpy.minimum(rects[:, 1], rects[:, 3])
+    y1 = numpy.maximum(rects[:, 1], rects[:, 3])
+    rects[:, 0] = x0
+    rects[:, 1] = y0
+    rects[:, 2] = x1
+    rects[:, 3] = y1
+
+
+@functools.total_ordering
+class RectCollection(Shape):
+    """
+    A collection of axis-aligned rectangles, stored as an Nx4 array of
+      `[xmin, ymin, xmax, ymax]` rows.
+    """
+    __slots__ = (
+        '_rects',
+        '_repetition', '_annotations',
+        )
+
+    _rects: NDArray[numpy.float64]
+
+    @property
+    def rects(self) -> NDArray[numpy.float64]:
+        return self._rects
+
+    @rects.setter
+    def rects(self, val: ArrayLike) -> None:
+        self._rects = _normalize_rects(val)
+
+    @property
+    def offset(self) -> NDArray[numpy.float64]:
+        return numpy.zeros(2)
+
+    @offset.setter
+    def offset(self, val: ArrayLike) -> None:
+        if numpy.any(val):
+            raise PatternError('RectCollection offset is forced to (0, 0)')
+
+    def set_offset(self, val: ArrayLike) -> Self:
+        if numpy.any(val):
+            raise PatternError('RectCollection offset is forced to (0, 0)')
+        return self
+
+    def translate(self, offset: ArrayLike) -> Self:
+        delta = numpy.asarray(offset, dtype=float).reshape(2)
+        self._rects[:, [0, 2]] += delta[0]
+        self._rects[:, [1, 3]] += delta[1]
+        return self
+
+    def __init__(
+            self,
+            rects: ArrayLike,
+            *,
+            offset: ArrayLike = (0.0, 0.0),
+            rotation: float = 0.0,
+            repetition: Repetition | None = None,
+            annotations: annotations_t = None,
+            ) -> None:
+        self.rects = rects
+        self.repetition = repetition
+        self.annotations = annotations
+        if rotation:
+            self.rotate(rotation)
+        if numpy.any(offset):
+            self.translate(offset)
+
+    @classmethod
+    def _from_raw(
+            cls,
+            *,
+            rects: NDArray[numpy.float64],
+            annotations: annotations_t = None,
+            repetition: Repetition | None = None,
+            ) -> Self:
+        new = cls.__new__(cls)
+        new._rects = rects
+        new._repetition = repetition
+        new._annotations = annotations
+        return new
+
+    @property
+    def polygon_vertices(self) -> Iterator[NDArray[numpy.float64]]:
+        for rect in self._rects:
+            xmin, ymin, xmax, ymax = rect
+            yield numpy.array([
+                [xmin, ymin],
+                [xmin, ymax],
+                [xmax, ymax],
+                [xmax, ymin],
+                ], dtype=float)
+
+    def __deepcopy__(self, memo: dict | None = None) -> Self:
+        memo = {} if memo is None else memo
+        new = copy.copy(self)
+        new._rects = self._rects.copy()
+        new._repetition = copy.deepcopy(self._repetition, memo)
+        new._annotations = copy.deepcopy(self._annotations)
+        return new
+
+    def _sorted_rects(self) -> NDArray[numpy.float64]:
+        if self._rects.shape[0] <= 1:
+            return self._rects
+        order = numpy.lexsort((self._rects[:, 3], self._rects[:, 2], self._rects[:, 1], self._rects[:, 0]))
+        return self._rects[order]
+
+    def __eq__(self, other: Any) -> bool:
+        return (
+            type(self) is type(other)
+            and numpy.array_equal(self._sorted_rects(), other._sorted_rects())
+            and self.repetition == other.repetition
+            and annotations_eq(self.annotations, other.annotations)
+            )
+
+    def __lt__(self, other: Shape) -> bool:
+        if type(self) is not type(other):
+            if repr(type(self)) != repr(type(other)):
+                return repr(type(self)) < repr(type(other))
+            return id(type(self)) < id(type(other))
+
+        other = cast('RectCollection', other)
+        self_rects = self._sorted_rects()
+        other_rects = other._sorted_rects()
+        if not numpy.array_equal(self_rects, other_rects):
+            min_len = min(self_rects.shape[0], other_rects.shape[0])
+            eq_mask = self_rects[:min_len] != other_rects[:min_len]
+            eq_lt = self_rects[:min_len] < other_rects[:min_len]
+            eq_lt_masked = eq_lt[eq_mask]
+            if eq_lt_masked.size > 0:
+                return bool(eq_lt_masked.flat[0])
+            return self_rects.shape[0] < other_rects.shape[0]
+        if self.repetition != other.repetition:
+            return rep2key(self.repetition) < rep2key(other.repetition)
+        return annotations_lt(self.annotations, other.annotations)
+
+    def to_polygons(
+            self,
+            num_vertices: int | None = None,      # unused  # noqa: ARG002
+            max_arclen: float | None = None,      # unused  # noqa: ARG002
+            ) -> list[Polygon]:
+        return [
+            Polygon(
+                vertices=vertices,
+                repetition=copy.deepcopy(self.repetition),
+                annotations=copy.deepcopy(self.annotations),
+                )
+            for vertices in self.polygon_vertices
+            ]
+
+    def get_bounds_single(self) -> NDArray[numpy.float64] | None:
+        if self._rects.size == 0:
+            return None
+        mins = self._rects[:, :2].min(axis=0)
+        maxs = self._rects[:, 2:].max(axis=0)
+        return numpy.vstack((mins, maxs))
+
+    def rotate(self, theta: float) -> Self:
+        quarter_turns = int(numpy.rint(theta / (pi / 2)))
+        if not numpy.isclose(theta, quarter_turns * (pi / 2)):
+            raise PatternError('RectCollection only supports Manhattan rotations')
+        turns = quarter_turns % 4
+        if turns == 0 or self._rects.size == 0:
+            return self
+
+        corners = numpy.stack((
+            self._rects[:, [0, 1]],
+            self._rects[:, [0, 3]],
+            self._rects[:, [2, 3]],
+            self._rects[:, [2, 1]],
+            ), axis=1)
+        flat = corners.reshape(-1, 2)
+        if turns == 1:
+            rotated = numpy.column_stack((-flat[:, 1], flat[:, 0]))
+        elif turns == 2:
+            rotated = -flat
+        else:
+            rotated = numpy.column_stack((flat[:, 1], -flat[:, 0]))
+        corners = rotated.reshape(corners.shape)
+        self._rects[:, 0] = corners[:, :, 0].min(axis=1)
+        self._rects[:, 1] = corners[:, :, 1].min(axis=1)
+        self._rects[:, 2] = corners[:, :, 0].max(axis=1)
+        self._rects[:, 3] = corners[:, :, 1].max(axis=1)
+        return self
+
+    def mirror(self, axis: int = 0) -> Self:
+        if axis not in (0, 1):
+            raise PatternError('Axis must be 0 or 1')
+        if axis == 0:
+            self._rects[:, [1, 3]] *= -1
+        else:
+            self._rects[:, [0, 2]] *= -1
+        _renormalize_rects_in_place(self._rects)
+        return self
+
+    def scale_by(self, c: float) -> Self:
+        self._rects *= c
+        _renormalize_rects_in_place(self._rects)
+        return self
+
+    def normalized_form(self, norm_value: float) -> normalized_shape_tuple:
+        rects = self._sorted_rects()
+        centers = 0.5 * (rects[:, :2] + rects[:, 2:])
+        offset = centers.mean(axis=0)
+        zeroed = rects.copy()
+        zeroed[:, [0, 2]] -= offset[0]
+        zeroed[:, [1, 3]] -= offset[1]
+        normed = zeroed / norm_value
+        return (
+            (type(self), normed.data.tobytes()),
+            (offset, 1.0, 0.0, False),
+            lambda: RectCollection(rects=normed * norm_value),
+            )
+
+    def __repr__(self) -> str:
+        if self._rects.size == 0:
+            return '<RectCollection r0>'
+        centers = 0.5 * (self._rects[:, :2] + self._rects[:, 2:])
+        centroid = centers.mean(axis=0)
+        return f'<RectCollection centroid {centroid} r{self._rects.shape[0]}>'

masque/shapes/text.py

@@ -73,27 +73,40 @@ class Text(PositionableImpl, RotatableImpl, Shape):
             mirrored: bool = False,
             repetition: Repetition | None = None,
             annotations: annotations_t = None,
-            raw: bool = False,
             ) -> None:
-        if raw:
+        self.offset = offset
-            assert isinstance(offset, numpy.ndarray)
+        self.string = string
-            self._offset = offset
+        self.height = height
-            self._string = string
+        self.rotation = rotation
-            self._height = height
+        self.mirrored = mirrored
-            self._rotation = rotation
+        self.repetition = repetition
-            self._mirrored = mirrored
+        self.annotations = annotations
-            self._repetition = repetition
-            self._annotations = annotations
-        else:
-            self.offset = offset
-            self.string = string
-            self.height = height
-            self.rotation = rotation
-            self.mirrored = mirrored
-            self.repetition = repetition
-            self.annotations = annotations
         self.font_path = font_path
 
+    @classmethod
+    def _from_raw(
+            cls,
+            *,
+            string: str,
+            height: float,
+            font_path: str,
+            offset: NDArray[numpy.float64],
+            rotation: float,
+            mirrored: bool,
+            annotations: annotations_t = None,
+            repetition: Repetition | None = None,
+            ) -> Self:
+        new = cls.__new__(cls)
+        new._offset = offset
+        new._string = string
+        new._height = height
+        new._rotation = rotation % (2 * pi)
+        new._mirrored = mirrored
+        new._repetition = repetition
+        new._annotations = annotations
+        new.font_path = font_path
+        return new
+
     def __deepcopy__(self, memo: dict | None = None) -> Self:
         memo = {} if memo is None else memo
         new = copy.copy(self)

masque/test/test_build_library.py

@@ -0,0 +1,485 @@
+from collections.abc import Iterator
+
+import pytest
+
+from ..builder import Pather
+from ..error import BuildError
+from ..library import BuildLibrary, BuildReport, ILibraryView, Library, cell, dangling_mode_t
+from ..pattern import Pattern
+from ..ports import Port
+
+
+def _owned_by(report: BuildReport, owner: str) -> set[str]:
+    return {
+        name for name, prov in report.provenance.items()
+        if prov.owner_declared_name == owner
+    }
+
+
+class _MetadataSource(ILibraryView):
+    def __init__(self, mapping: dict[str, Pattern], child_graph: dict[str, set[str]]) -> None:
+        self.mapping = mapping
+        self._child_graph = child_graph
+        self.loads = 0
+
+    def __getitem__(self, key: str) -> Pattern:
+        self.loads += 1
+        return self.mapping[key]
+
+    def __iter__(self) -> Iterator[str]:
+        return iter(self.mapping)
+
+    def __len__(self) -> int:
+        return len(self.mapping)
+
+    def __contains__(self, key: object) -> bool:
+        return key in self.mapping
+
+    def source_order(self) -> tuple[str, ...]:
+        return tuple(self.mapping)
+
+    def child_graph(self, dangling: dangling_mode_t = 'error') -> dict[str, set[str]]:     # noqa: ARG002
+        return self._child_graph
+
+
+def test_build_library_traces_declared_dependencies_out_of_order() -> None:
+    builder = BuildLibrary()
+
+    def make_parent(lib: BuildLibrary) -> Pattern:
+        pat = Pattern()
+        pat.ref("child")
+        assert lib.abstract("child").name == "child"
+        return pat
+
+    builder.cells.parent = cell(make_parent)(builder)
+    builder["child"] = Pattern(ports={"p": Port((0, 0), 0)})
+
+    built, report = builder.build()
+
+    assert "parent" in built
+    assert "child" in built
+    assert report.dependency_graph["parent"] == frozenset({"child"})
+    assert report.provenance["parent"].kind == "declared"
+
+
+def test_build_library_tracks_helper_provenance_and_tree_merge_renames() -> None:
+    builder = BuildLibrary()
+
+    def make_top(lib: BuildLibrary) -> Pattern:
+        tree = Library({"_helper": Pattern()})
+        name_a = lib << tree
+        name_b = lib << tree
+        top = Pattern()
+        top.ref(name_a)
+        top.ref(name_b)
+        return top
+
+    builder.cells.top = cell(make_top)(builder)
+    _built, report = builder.build()
+
+    helpers = [
+        (name, prov) for name, prov in report.provenance.items()
+        if prov.owner_declared_name == "top" and prov.kind == "helper"
+    ]
+
+    assert "top" in _owned_by(report, "top")
+    assert len(helpers) == 2
+    assert any(name != prov.requested_name for name, prov in helpers)
+
+
+def test_build_library_authoring_tree_merge_renames_repeated_single_use_names() -> None:
+    builder = BuildLibrary()
+    tree = Library({"_helper": Pattern()})
+
+    name_a = builder << tree
+    name_b = builder << tree
+    built, report = builder.build()
+
+    assert name_a == "_helper"
+    assert name_b != "_helper"
+    assert name_a in built
+    assert name_b in built
+    assert report.provenance[name_b].requested_name == name_b
+
+
+def test_build_library_authoring_tree_merge_remaps_internal_refs() -> None:
+    builder = BuildLibrary()
+    builder["_helper"] = Pattern()
+    helper = Pattern()
+    top = Pattern()
+    top.ref("_helper")
+
+    top_name = builder << Library({"_helper": helper, "top": top})
+    built, _report = builder.build()
+
+    assert top_name == "top"
+    assert "_helper" not in built[top_name].refs
+    assert any(name != "_helper" for name in built[top_name].refs)
+
+
+def test_build_library_requires_build_session_for_reads_and_freezes_after_build() -> None:
+    builder = BuildLibrary()
+    builder["leaf"] = Pattern()
+
+    with pytest.raises(BuildError, match="validate\\(\\) or build\\(\\)"):
+        _ = builder["leaf"]
+
+    with pytest.raises(BuildError, match="write-only"):
+        _ = builder.cells.leaf
+
+    built, report = builder.build(output="library")
+
+    assert isinstance(built, Library)
+    assert report.requested_roots == ("leaf",)
+
+    with pytest.raises(BuildError, match="frozen"):
+        builder["later"] = Pattern()
+    with pytest.raises(BuildError, match="frozen"):
+        builder.build()
+
+
+def test_build_library_validate_is_retryable_after_failure() -> None:
+    builder = BuildLibrary()
+
+    def make_parent(lib: BuildLibrary) -> Pattern:
+        pat = Pattern()
+        pat.ref("child")
+        lib.abstract("child")
+        return pat
+
+    builder.cells.parent = cell(make_parent)(builder)
+
+    with pytest.raises(BuildError, match='Failed while building declared cell "parent"'):
+        builder.validate()
+
+    builder["child"] = Pattern(ports={"p": Port((0, 0), 0)})
+    report = builder.validate()
+
+    assert report.dependency_graph["parent"] == frozenset({"child"})
+
+
+def test_build_library_depends_on_supports_hidden_dependencies_for_partial_validation() -> None:
+    builder = BuildLibrary()
+    builder["child"] = Pattern()
+
+    def make_parent() -> Pattern:
+        pat = Pattern()
+        pat.ref("child")
+        return pat
+
+    builder.cells.parent = cell(make_parent)().depends_on("child")
+    report = builder.validate(names=("parent",))
+
+    assert report.requested_roots == ("parent",)
+    assert report.dependency_graph["parent"] == frozenset({"child"})
+
+
+def test_build_library_validate_rejects_removed_output_argument() -> None:
+    builder = BuildLibrary()
+    builder["leaf"] = Pattern()
+
+    with pytest.raises(TypeError):
+        builder.validate(output="library")   # type: ignore[call-arg]
+
+
+def test_build_library_rejects_unknown_build_output_mode() -> None:
+    builder = BuildLibrary()
+    builder["leaf"] = Pattern()
+
+    with pytest.raises(ValueError, match="Unknown build output mode"):
+        builder.build(output="bad")   # type: ignore[arg-type]
+
+
+def test_build_library_allows_helper_writes_via_pather() -> None:
+    builder = BuildLibrary()
+    builder["leaf"] = Pattern(ports={"a": Port((0, 0), 0)})
+
+    def make_top(lib: BuildLibrary) -> Pattern:
+        helper = Pather(library=lib, ports="leaf", name="_route")
+        top = Pattern()
+        top.ref("_route")
+        top.ref("leaf")
+        top.ports.update(helper.pattern.ports)
+        return top
+
+    builder.cells.top = cell(make_top)(builder)
+    _built, report = builder.build()
+
+    helper_prov = report.provenance["_route"]
+    assert helper_prov.kind == "helper"
+    assert helper_prov.owner_declared_name == "top"
+
+
+def test_build_library_contains_tracks_active_session_names() -> None:
+    builder = BuildLibrary()
+    builder["leaf"] = Pattern()
+    builder.add_source(Library({"src": Pattern()}))
+
+    def make_top(lib: BuildLibrary) -> Pattern:
+        assert "leaf" in lib
+        assert "src" in lib
+        assert "_helper" not in lib
+        lib["_helper"] = Pattern()
+        assert "_helper" in lib
+        return Pattern()
+
+    builder.cells.top = cell(make_top)(builder)
+    built, _report = builder.build()
+
+    assert "_helper" in built
+
+
+def test_build_library_preserves_source_cells_and_records_source_provenance() -> None:
+    source = Library({"src": Pattern()})
+    builder = BuildLibrary()
+    builder.add_source(source)
+    builder.cells.top = cell(lambda: Pattern())()
+
+    built, report = builder.build()
+
+    assert "src" in built
+    assert report.provenance["src"].kind == "source"
+
+
+def test_build_library_add_source_can_rename_every_source_cell() -> None:
+    source = Library()
+    source["child"] = Pattern()
+    parent = Pattern()
+    parent.ref("child")
+    source["parent"] = parent
+
+    builder = BuildLibrary()
+    rename_map = builder.add_source(
+        source,
+        rename_theirs=lambda _lib, name: f"mapped_{name}",
+        rename_when="always",
+    )
+    built, report = builder.build()
+
+    assert rename_map == {
+        "child": "mapped_child",
+        "parent": "mapped_parent",
+    }
+    assert "mapped_child" in built["mapped_parent"].refs
+    assert report.provenance["mapped_child"].requested_name == "child"
+
+
+def test_build_library_authoring_tree_merge_keeps_source_view_lazy() -> None:
+    child = Pattern()
+    top = Pattern()
+    top.ref("child")
+    source = _MetadataSource(
+        {"child": child, "top": top},
+        {"child": set(), "top": {"child"}},
+    )
+
+    builder = BuildLibrary()
+    top_name = builder << source
+    built, _report = builder.build()
+
+    assert top_name == "top"
+    assert "top" in built
+    assert source.loads == 0
+
+
+def test_build_library_authoring_source_tree_merge_returns_renamed_top() -> None:
+    existing = Pattern()
+    source_top = Pattern()
+    source = _MetadataSource(
+        {"_helper": source_top},
+        {"_helper": set()},
+    )
+
+    builder = BuildLibrary()
+    builder["_helper"] = existing
+    top_name = builder << source
+    built, _report = builder.build()
+
+    assert top_name != "_helper"
+    assert top_name in built
+    assert source.loads == 0
+
+
+def test_build_library_authoring_source_tree_merge_remaps_renamed_child_on_materialization() -> None:
+    source_helper = Pattern()
+    source_top = Pattern()
+    source_top.ref("_helper")
+    source = _MetadataSource(
+        {"_helper": source_helper, "top": source_top},
+        {"_helper": set(), "top": {"_helper"}},
+    )
+
+    builder = BuildLibrary()
+    builder["_helper"] = Pattern()
+    top_name = builder << source
+    built, _report = builder.build(output="library")
+
+    assert top_name == "top"
+    assert "_helper" not in built[top_name].refs
+    assert source.loads == 2
+
+
+def test_build_library_rejects_authoring_tree_le_before_mutating() -> None:
+    builder = BuildLibrary()
+
+    with pytest.raises(BuildError, match="__le__"):
+        _abstract = builder <= Library({"leaf": Pattern()})
+
+    assert list(builder) == []
+
+
+def test_build_library_rejects_source_cells_added_after_add_source() -> None:
+    source = Library({"src": Pattern()})
+    builder = BuildLibrary()
+    builder.add_source(source)
+    source["late"] = Pattern()
+
+    with pytest.raises(BuildError, match="Do not structurally mutate source libraries"):
+        builder.build()
+
+
+def test_build_library_rejects_source_cells_removed_after_add_source() -> None:
+    source = Library({"src": Pattern()})
+    builder = BuildLibrary()
+    builder.add_source(source)
+    del source["src"]
+
+    with pytest.raises(BuildError, match="Do not structurally mutate source libraries"):
+        builder.build()
+
+
+def test_build_library_rejects_add_source_during_build() -> None:
+    builder = BuildLibrary()
+
+    def make_top(lib: BuildLibrary) -> Pattern:
+        lib.add_source(Library({"src": Pattern()}))
+        return Pattern()
+
+    builder.cells.top = cell(make_top)(builder)
+
+    with pytest.raises(BuildError, match="add_source"):
+        builder.build()
+
+
+def test_build_library_rejects_renaming_imported_source_cells_during_authoring() -> None:
+    builder = BuildLibrary()
+    builder.add_source(Library({"src": Pattern()}))
+
+    with pytest.raises(BuildError, match="add_source"):
+        builder.rename("src", "renamed_src", move_references=True)
+
+
+def test_build_library_rejects_renaming_declared_cells_during_authoring() -> None:
+    builder = BuildLibrary()
+    builder["declared"] = Pattern()
+
+    with pytest.raises(BuildError, match='Cannot rename declared build cell "declared"'):
+        builder.rename("declared", "renamed_declared")
+
+
+def test_build_library_helper_rename_updates_provenance_owner() -> None:
+    builder = BuildLibrary()
+
+    def make_top(lib: BuildLibrary) -> Pattern:
+        lib["_helper"] = Pattern()
+        lib.rename("_helper", "final_helper")
+        top = Pattern()
+        top.ref("final_helper")
+        return top
+
+    builder.cells.top = cell(make_top)(builder)
+    built, report = builder.build()
+
+    assert "final_helper" in built
+    assert "_helper" not in built
+    owned = _owned_by(report, "top")
+    assert "final_helper" in owned
+    assert "_helper" not in owned
+    prov = report.provenance["final_helper"]
+    assert prov.kind == "helper"
+    assert prov.requested_name == "_helper"
+
+
+def test_build_library_helper_delete_removes_provenance_and_ownership() -> None:
+    builder = BuildLibrary()
+
+    def make_top(lib: BuildLibrary) -> Pattern:
+        lib["_helper"] = Pattern()
+        del lib["_helper"]
+        return Pattern()
+
+    builder.cells.top = cell(make_top)(builder)
+    built, report = builder.build()
+
+    assert "_helper" not in built
+    assert "_helper" not in report.provenance
+    assert _owned_by(report, "top") == {"top"}
+
+
+def test_build_library_helper_rename_after_auto_rename_preserves_requested_name() -> None:
+    builder = BuildLibrary()
+
+    def make_top(lib: BuildLibrary) -> Pattern:
+        tree = Library({"_helper": Pattern()})
+        _ = lib << tree
+        renamed = lib << tree
+        lib.rename(renamed, "final_helper")
+        top = Pattern()
+        top.ref("_helper")
+        top.ref("final_helper")
+        return top
+
+    builder.cells.top = cell(make_top)(builder)
+    built, report = builder.build()
+
+    assert "final_helper" in built
+    prov = report.provenance["final_helper"]
+    assert prov.requested_name == "_helper"
+
+
+def test_build_library_rejects_renaming_declared_or_source_cells_during_build() -> None:
+    declared = BuildLibrary()
+    declared["leaf"] = Pattern()
+
+    def rename_declared(lib: BuildLibrary) -> Pattern:
+        lib.rename("leaf", "renamed_leaf")
+        return Pattern()
+
+    declared.cells.top = cell(rename_declared)(declared)
+    with pytest.raises(BuildError, match='Cannot rename declared build cell "leaf"'):
+        declared.build()
+
+    source = BuildLibrary()
+    source.add_source(Library({"src": Pattern()}))
+
+    def rename_source(lib: BuildLibrary) -> Pattern:
+        lib.rename("src", "renamed_src")
+        return Pattern()
+
+    source.cells.top = cell(rename_source)(source)
+    with pytest.raises(BuildError, match='Cannot rename imported source cell "src"'):
+        source.build()
+
+
+def test_build_library_rejects_deleting_declared_or_source_cells_during_build() -> None:
+    declared = BuildLibrary()
+    declared["leaf"] = Pattern()
+
+    def delete_declared(lib: BuildLibrary) -> Pattern:
+        del lib["leaf"]
+        return Pattern()
+
+    declared.cells.top = cell(delete_declared)(declared)
+    with pytest.raises(BuildError, match='Cannot delete declared build cell "leaf"'):
+        declared.build()
+
+    source = BuildLibrary()
+    source.add_source(Library({"src": Pattern()}))
+
+    def delete_source(lib: BuildLibrary) -> Pattern:
+        del lib["src"]
+        return Pattern()
+
+    source.cells.top = cell(delete_source)(source)
+    with pytest.raises(BuildError, match='Cannot delete imported source cell "src"'):
+        source.build()

masque/test/test_file_format_roundtrip.py

@@ -5,7 +5,7 @@ from numpy.testing import assert_allclose
 
 from ..pattern import Pattern
 from ..library import Library
-from ..shapes import Path as MPath, Circle, Polygon
+from ..shapes import Path as MPath, Circle, Polygon, RectCollection
 from ..repetition import Grid, Arbitrary
 
 def create_test_library(for_gds: bool = False) -> Library:
@@ -109,3 +109,30 @@ def test_oasis_full_roundtrip(tmp_path: Path) -> None:
     assert poly.repetition is not None
     assert isinstance(poly.repetition, Grid)
     assert poly.repetition.a_count == 5
+
+
+def test_gdsii_rect_collection_roundtrip(tmp_path: Path) -> None:
+    from ..file import gdsii
+
+    lib = Library()
+    pat = Pattern()
+    pat.shapes[(5, 0)].append(
+        RectCollection(
+            rects=[[0, 0, 10, 5], [20, -5, 30, 10]],
+            annotations={'1': ['rects']},
+            )
+        )
+    lib['rects'] = pat
+
+    gds_file = tmp_path / 'rect_collection.gds'
+    gdsii.writefile(lib, gds_file, meters_per_unit=1e-9)
+
+    read_lib, _ = gdsii.readfile(gds_file)
+    polys = read_lib['rects'].shapes[(5, 0)]
+
+    assert len(polys) == 2
+    assert all(isinstance(poly, Polygon) for poly in polys)
+    assert_allclose(polys[0].vertices, [[0, 0], [0, 5], [10, 5], [10, 0]])
+    assert_allclose(polys[1].vertices, [[20, -5], [20, 10], [30, 10], [30, -5]])
+    assert polys[0].annotations == {'1': ['rects']}
+    assert polys[1].annotations == {'1': ['rects']}

masque/test/test_gdsii_arrow.py

@@ -0,0 +1,603 @@
+from pathlib import Path
+import subprocess
+import sys
+import textwrap
+
+import klamath
+import numpy
+import pytest
+
+pytest.importorskip('pyarrow')
+
+from .. import Ref, Label, PatternError
+from ..library import Library
+from ..pattern import Pattern
+from ..repetition import Grid
+from ..shapes import Path as MPath, Polygon, PolyCollection, RectCollection
+from ..file import gdsii, gdsii_arrow
+from ..file.gdsii_perf import write_fixture
+
+
+if not gdsii_arrow.is_available():
+    pytest.skip('klamath_rs_ext shared library is not available', allow_module_level=True)
+
+
+def _annotations_key(annotations: dict[str, list[object]] | None) -> tuple[tuple[str, tuple[object, ...]], ...] | None:
+    if not annotations:
+        return None
+    return tuple(sorted((key, tuple(values)) for key, values in annotations.items()))
+
+
+def _coord_key(values: object) -> tuple[int, ...] | tuple[tuple[int, int], ...]:
+    arr = numpy.rint(numpy.asarray(values, dtype=float)).astype(int)
+    if arr.ndim == 1:
+        return tuple(arr.tolist())
+    return tuple(tuple(row.tolist()) for row in arr)
+
+
+def _canonical_polygon_key(vertices: object) -> tuple[tuple[int, int], ...]:
+    arr = numpy.rint(numpy.asarray(vertices, dtype=float)).astype(int)
+    rows = [tuple(tuple(row.tolist()) for row in numpy.roll(arr, -shift, axis=0)) for shift in range(arr.shape[0])]
+    rev = arr[::-1]
+    rows.extend(tuple(tuple(row.tolist()) for row in numpy.roll(rev, -shift, axis=0)) for shift in range(rev.shape[0]))
+    return min(rows)
+
+
+def _shape_key(shape: object, layer: tuple[int, int]) -> list[tuple[object, ...]]:
+    if isinstance(shape, MPath):
+        cap_extensions = None if shape.cap_extensions is None else _coord_key(shape.cap_extensions)
+        return [(
+            'path',
+            layer,
+            _coord_key(shape.vertices),
+            _coord_key(shape.offset),
+            int(round(float(shape.width))),
+            shape.cap.name,
+            cap_extensions,
+            _annotations_key(shape.annotations),
+            )]
+
+    keys = []
+    for poly in shape.to_polygons():
+        keys.append((
+            'polygon',
+            layer,
+            _canonical_polygon_key(poly.vertices),
+            _coord_key(poly.offset),
+            _annotations_key(poly.annotations),
+            ))
+    return keys
+
+
+def _ref_keys(target: str, ref: object) -> list[tuple[object, ...]]:
+    keys = []
+    for transform in ref.as_transforms():
+        keys.append((
+            target,
+            _coord_key(transform[:2]),
+            round(float(transform[2]), 8),
+            round(float(transform[4]), 8),
+            bool(int(round(float(transform[3])))),
+            _annotations_key(ref.annotations),
+            ))
+    return keys
+
+
+def _label_key(layer: tuple[int, int], label: object) -> tuple[object, ...]:
+    return (
+        layer,
+        label.string,
+        _coord_key(label.offset),
+        _annotations_key(label.annotations),
+        )
+
+
+def _pattern_summary(pattern: Pattern) -> dict[str, object]:
+    shape_keys: list[tuple[object, ...]] = []
+    for layer, shapes in pattern.shapes.items():
+        for shape in shapes:
+            shape_keys.extend(_shape_key(shape, layer))
+
+    ref_keys: list[tuple[object, ...]] = []
+    for target, refs in pattern.refs.items():
+        for ref in refs:
+            ref_keys.extend(_ref_keys(target, ref))
+
+    label_keys = [
+        _label_key(layer, label)
+        for layer, labels in pattern.labels.items()
+        for label in labels
+        ]
+
+    return {
+        'shapes': sorted(shape_keys),
+        'refs': sorted(ref_keys),
+        'labels': sorted(label_keys),
+        }
+
+
+def _library_summary(lib: Library) -> dict[str, dict[str, object]]:
+    return {name: _pattern_summary(pattern) for name, pattern in lib.items()}
+
+
+def _make_arrow_test_library() -> Library:
+    lib = Library()
+
+    leaf = Pattern()
+    leaf.polygon((1, 0), vertices=[[0, 0], [10, 0], [10, 10], [0, 10]], annotations={'1': ['leaf-poly']})
+    leaf.polygon((2, 0), vertices=[[40, 0], [50, 0], [50, 10], [40, 10]])
+    leaf.polygon((1, 0), vertices=[[20, 0], [30, 0], [30, 10], [20, 10]])
+    leaf.polygon((1, 0), vertices=[[80, 0], [90, 0], [90, 10], [80, 10]])
+    leaf.polygon((2, 0), vertices=[[60, 0], [70, 0], [70, 10], [60, 10]], annotations={'18': ['leaf-poly-2']})
+    leaf.label((10, 0), string='LEAF', offset=(3, 4), annotations={'10': ['leaf-label']})
+    lib['leaf'] = leaf
+
+    child = Pattern()
+    child.path(
+        (2, 0),
+        vertices=[[0, 0], [15, 5], [30, 5]],
+        width=6,
+        cap=MPath.Cap.SquareCustom,
+        cap_extensions=(2, 4),
+        annotations={'2': ['child-path']},
+        )
+    child.label((11, 0), string='CHILD', offset=(7, 8), annotations={'11': ['child-label']})
+    child.ref('leaf', offset=(100, 200), rotation=numpy.pi / 2, mirrored=True, scale=1.25, annotations={'12': ['child-ref']})
+    lib['child'] = child
+
+    sibling = Pattern()
+    sibling.polygon((3, 0), vertices=[[0, 0], [5, 0], [5, 6], [0, 6]])
+    sibling.label((12, 0), string='SIB', offset=(1, 2), annotations={'13': ['sib-label']})
+    sibling.ref(
+        'leaf',
+        offset=(-50, 60),
+        repetition=Grid(a_vector=(20, 0), a_count=3, b_vector=(0, 30), b_count=2),
+        annotations={'14': ['sib-ref']},
+        )
+    lib['sibling'] = sibling
+
+    fanout = Pattern()
+    fanout.ref('leaf', offset=(0, 0))
+    fanout.ref('child', offset=(10, 0), mirrored=True, rotation=numpy.pi / 6, scale=1.1)
+    fanout.ref('leaf', offset=(20, 0))
+    fanout.ref('leaf', offset=(30, 0), repetition=Grid(a_vector=(5, 0), a_count=2, b_vector=(0, 7), b_count=3))
+    fanout.ref('child', offset=(40, 0), mirrored=True, rotation=numpy.pi / 4, scale=1.2,
+               repetition=Grid(a_vector=(9, 0), a_count=2, b_vector=(0, 11), b_count=2))
+    fanout.ref('leaf', offset=(50, 0), repetition=Grid(a_vector=(6, 0), a_count=3, b_vector=(0, 8), b_count=2))
+    fanout.ref('leaf', offset=(60, 0), annotations={'19': ['fanout-sref']})
+    fanout.ref('child', offset=(70, 0), repetition=Grid(a_vector=(4, 0), a_count=2, b_vector=(0, 5), b_count=2),
+               annotations={'20': ['fanout-aref']})
+    lib['fanout'] = fanout
+
+    top = Pattern()
+    top.ref('child', offset=(500, 600), annotations={'15': ['top-child-ref']})
+    top.ref('sibling', offset=(-100, 50), rotation=numpy.pi, annotations={'16': ['top-sibling-ref']})
+    top.ref('fanout', offset=(250, -75))
+    top.label((13, 0), string='TOP', offset=(0, 0), annotations={'17': ['top-label']})
+    lib['top'] = top
+
+    return lib
+
+
+def _write_invalid_path_type_fixture(path: Path) -> None:
+    with path.open('wb') as stream:
+        header = klamath.library.FileHeader(
+            name=b'test',
+            user_units_per_db_unit=1.0,
+            meters_per_db_unit=1e-9,
+        )
+        header.write(stream)
+        elem = klamath.elements.Path(
+            layer=(1, 0),
+            path_type=3,
+            width=10,
+            extension=(0, 0),
+            xy=numpy.array([[0, 0], [10, 0]], dtype=numpy.int32),
+            properties={},
+        )
+        klamath.library.write_struct(stream, name=b'top', elements=[elem])
+        klamath.records.ENDLIB.write(stream, None)
+
+
+def test_gdsii_arrow_matches_gdsii_readfile(tmp_path: Path) -> None:
+    lib = _make_arrow_test_library()
+    gds_file = tmp_path / 'arrow_roundtrip.gds'
+    gdsii.writefile(lib, gds_file, meters_per_unit=1e-9)
+
+    canonical_lib, canonical_info = gdsii.readfile(gds_file)
+    arrow_lib, arrow_info = gdsii_arrow.readfile(gds_file)
+
+    assert canonical_info == arrow_info
+    assert _library_summary(canonical_lib) == _library_summary(arrow_lib)
+
+
+def test_gdsii_arrow_matches_gdsii_readfile_for_gzipped_file(tmp_path: Path) -> None:
+    lib = _make_arrow_test_library()
+    gds_file = tmp_path / 'arrow_roundtrip.gds.gz'
+    gdsii.writefile(lib, gds_file, meters_per_unit=1e-9)
+
+    canonical_lib, canonical_info = gdsii.readfile(gds_file)
+    arrow_lib, arrow_info = gdsii_arrow.readfile(gds_file)
+
+    assert canonical_info == arrow_info
+    assert _library_summary(canonical_lib) == _library_summary(arrow_lib)
+
+
+def test_gdsii_arrow_readfile_arrow_returns_native_payload(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'many_cells_native.gds'
+    manifest = write_fixture(gds_file, preset='many_cells', scale=0.001)
+
+    libarr, info = gdsii_arrow.readfile_arrow(gds_file)
+
+    assert info['name'] == manifest.library_name
+    assert libarr['lib_name'].as_py() == manifest.library_name
+    assert len(libarr['cells']) == manifest.cells
+    assert 0 < len(libarr['layers']) <= manifest.layers
+
+
+def test_gdsii_arrow_readfile_arrow_reads_gzipped_file(tmp_path: Path) -> None:
+    lib = _make_arrow_test_library()
+    gds_file = tmp_path / 'native_payload.gds.gz'
+    gdsii.writefile(lib, gds_file, meters_per_unit=1e-9)
+
+    libarr, info = gdsii_arrow.readfile_arrow(gds_file)
+
+    assert info['name'] == 'masque-klamath'
+    assert libarr['lib_name'].as_py() == 'masque-klamath'
+    assert len(libarr['cells']) == len(lib)
+    assert len(libarr['layers']) > 0
+
+
+def test_gdsii_arrow_removed_raw_mode_arg(tmp_path: Path) -> None:
+    lib = _make_arrow_test_library()
+    gds_file = tmp_path / 'removed_raw_mode.gds'
+    gdsii.writefile(lib, gds_file, meters_per_unit=1e-9)
+
+    libarr, _ = gdsii_arrow.readfile_arrow(gds_file)
+
+    with pytest.raises(TypeError):
+        gdsii_arrow.readfile(gds_file, raw_mode=False)
+
+    with pytest.raises(TypeError):
+        gdsii_arrow.read_arrow(libarr, raw_mode=False)
+
+
+def test_gdsii_arrow_invalid_input_raises_klamath_error(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'invalid.gds'
+    gds_file.write_bytes(b'not-a-gds')
+
+    script = textwrap.dedent(f"""
+        from masque.file import gdsii_arrow
+        try:
+            gdsii_arrow.readfile({str(gds_file)!r})
+        except Exception as exc:
+            print(type(exc).__module__)
+            print(type(exc).__qualname__)
+            print(exc)
+        else:
+            raise SystemExit('expected gdsii_arrow.readfile() to fail')
+        """)
+    result = subprocess.run([sys.executable, '-c', script], capture_output=True, text=True, check=False)
+
+    assert result.returncode == 0, result.stderr
+    assert 'klamath.basic' in result.stdout
+    assert 'KlamathError' in result.stdout
+
+
+def test_gdsii_arrow_reads_small_perf_fixture(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'many_cells_smoke.gds'
+    manifest = write_fixture(gds_file, preset='many_cells', scale=0.001)
+
+    lib, info = gdsii_arrow.readfile(gds_file)
+
+    assert info['name'] == manifest.library_name
+    assert len(lib) == manifest.cells
+    assert 'TOP' in lib
+    assert sum(len(refs) for refs in lib['TOP'].refs.values()) > 0
+
+
+def test_gdsii_arrow_degenerate_aref_decodes_as_single_transform(tmp_path: Path) -> None:
+    lib = Library()
+    leaf = Pattern()
+    leaf.polygon((1, 0), vertices=[[0, 0], [5, 0], [5, 5], [0, 5]])
+    lib['leaf'] = leaf
+
+    top = Pattern()
+    top.ref('leaf', offset=(100, 200), repetition=Grid(a_vector=(7, 0), a_count=1, b_vector=(0, 9), b_count=1))
+    lib['top'] = top
+
+    gds_file = tmp_path / 'degenerate_aref.gds'
+    gdsii.writefile(lib, gds_file, meters_per_unit=1e-9)
+
+    canonical_lib, _ = gdsii.readfile(gds_file)
+    arrow_lib, _ = gdsii_arrow.readfile(gds_file)
+    assert _library_summary(arrow_lib) == _library_summary(canonical_lib)
+
+    decoded_ref = arrow_lib['top'].refs['leaf'][0]
+    assert decoded_ref.repetition is None
+
+
+def test_gdsii_arrow_plain_srefs_decode_without_arbitrary(tmp_path: Path) -> None:
+    lib = _make_arrow_test_library()
+    gds_file = tmp_path / 'plain_srefs.gds'
+    gdsii.writefile(lib, gds_file, meters_per_unit=1e-9)
+
+    arrow_lib, _ = gdsii_arrow.readfile(gds_file)
+    fanout = arrow_lib['fanout']
+
+    plain_leaf_refs = [
+        ref
+        for ref in fanout.refs['leaf']
+        if ref.annotations is None and ref.repetition is None
+        ]
+    assert len(plain_leaf_refs) == 2
+    assert all(type(ref.repetition) is not Grid for ref in plain_leaf_refs)
+
+
+def test_gdsii_arrow_degenerate_aref_schema_normalizes_to_sref(tmp_path: Path) -> None:
+    lib = Library()
+    leaf = Pattern()
+    leaf.polygon((1, 0), vertices=[[0, 0], [5, 0], [5, 5], [0, 5]])
+    lib['leaf'] = leaf
+
+    top = Pattern()
+    top.ref('leaf', offset=(100, 200), repetition=Grid(a_vector=(7, 0), a_count=1, b_vector=(0, 9), b_count=1))
+    lib['top'] = top
+
+    gds_file = tmp_path / 'degenerate_aref_schema.gds'
+    gdsii.writefile(lib, gds_file, meters_per_unit=1e-9)
+
+    libarr = gdsii_arrow._read_to_arrow(gds_file)[0]
+    cells = libarr['cells'].values
+    cell_ids = cells.field('id').to_numpy()
+    cell_names = libarr['cell_names'].as_py()
+    top_index = next(ii for ii, cell_id in enumerate(cell_ids) if cell_names[cell_id] == 'top')
+
+    srefs = cells.field('srefs')[top_index].as_py()
+    arefs = cells.field('arefs')[top_index].as_py()
+
+    assert len(srefs) == 1
+    assert len(arefs) == 0
+    assert cell_names[srefs[0]['target']] == 'leaf'
+
+
+def test_gdsii_arrow_boundary_batch_schema(tmp_path: Path) -> None:
+    lib = _make_arrow_test_library()
+    gds_file = tmp_path / 'arrow_batches.gds'
+    gdsii.writefile(lib, gds_file, meters_per_unit=1e-9)
+
+    libarr = gdsii_arrow._read_to_arrow(gds_file)[0]
+    cells = libarr['cells'].values
+    cell_ids = cells.field('id').to_numpy()
+    cell_names = libarr['cell_names'].as_py()
+    layer_table = [
+        ((int(layer) >> 16) & 0xFFFF, int(layer) & 0xFFFF)
+        for layer in libarr['layers'].values.to_numpy()
+        ]
+
+    leaf_index = next(ii for ii, cell_id in enumerate(cell_ids) if cell_names[cell_id] == 'leaf')
+
+    rect_batches = cells.field('rect_batches')[leaf_index].as_py()
+    boundary_batches = cells.field('boundary_batches')[leaf_index].as_py()
+    boundary_props = cells.field('boundary_props')[leaf_index].as_py()
+
+    assert len(rect_batches) == 2
+    assert len(boundary_batches) == 0
+    assert len(boundary_props) == 2
+
+    rects_by_layer = {tuple(layer_table[entry['layer']]): entry for entry in rect_batches}
+    assert rects_by_layer[(1, 0)]['rects'] == [20, 0, 30, 10, 80, 0, 90, 10]
+    assert rects_by_layer[(2, 0)]['rects'] == [40, 0, 50, 10]
+
+    props_by_layer = {tuple(layer_table[entry['layer']]): entry for entry in boundary_props}
+    assert sorted(props_by_layer) == [(1, 0), (2, 0)]
+    assert props_by_layer[(1, 0)]['properties'][0]['value'] == 'leaf-poly'
+    assert props_by_layer[(2, 0)]['properties'][0]['value'] == 'leaf-poly-2'
+
+
+def test_gdsii_arrow_rect_batch_schema_for_mixed_layer(tmp_path: Path) -> None:
+    lib = Library()
+    top = Pattern()
+    top.shapes[(1, 0)].append(RectCollection(rects=[[0, 0, 10, 10], [20, 0, 30, 10], [40, 0, 50, 10], [60, 0, 70, 10]]))
+    top.polygon((1, 0), vertices=[[80, 0], [85, 10], [90, 0]])
+    top.polygon((1, 0), vertices=[[100, 0], [105, 10], [110, 0]])
+    lib['top'] = top
+
+    gds_file = tmp_path / 'arrow_rect_batches.gds'
+    gdsii.writefile(lib, gds_file, meters_per_unit=1e-9)
+
+    libarr = gdsii_arrow._read_to_arrow(gds_file)[0]
+    cells = libarr['cells'].values
+    cell_ids = cells.field('id').to_numpy()
+    cell_names = libarr['cell_names'].as_py()
+    layer_table = [
+        ((int(layer) >> 16) & 0xFFFF, int(layer) & 0xFFFF)
+        for layer in libarr['layers'].values.to_numpy()
+        ]
+    top_index = next(ii for ii, cell_id in enumerate(cell_ids) if cell_names[cell_id] == 'top')
+
+    rect_batches = cells.field('rect_batches')[top_index].as_py()
+    boundary_batches = cells.field('boundary_batches')[top_index].as_py()
+
+    assert len(rect_batches) == 1
+    assert tuple(layer_table[rect_batches[0]['layer']]) == (1, 0)
+    assert rect_batches[0]['rects'] == [
+        0, 0, 10, 10,
+        20, 0, 30, 10,
+        40, 0, 50, 10,
+        60, 0, 70, 10,
+        ]
+
+    assert len(boundary_batches) == 1
+    assert tuple(layer_table[boundary_batches[0]['layer']]) == (1, 0)
+    assert boundary_batches[0]['vertex_offsets'] == [0, 3]
+
+
+def test_gdsii_arrow_ref_schema(tmp_path: Path) -> None:
+    lib = _make_arrow_test_library()
+    gds_file = tmp_path / 'arrow_ref_batches.gds'
+    gdsii.writefile(lib, gds_file, meters_per_unit=1e-9)
+
+    libarr = gdsii_arrow._read_to_arrow(gds_file)[0]
+    cells = libarr['cells'].values
+    cell_ids = cells.field('id').to_numpy()
+    cell_names = libarr['cell_names'].as_py()
+
+    fanout_index = next(ii for ii, cell_id in enumerate(cell_ids) if cell_names[cell_id] == 'fanout')
+
+    srefs = cells.field('srefs')[fanout_index].as_py()
+    arefs = cells.field('arefs')[fanout_index].as_py()
+    sref_props = cells.field('sref_props')[fanout_index].as_py()
+    aref_props = cells.field('aref_props')[fanout_index].as_py()
+
+    sref_target_ids = [entry['target'] for entry in srefs]
+    sref_targets = [cell_names[target] for target in sref_target_ids]
+    assert sorted(sref_targets) == ['child', 'leaf', 'leaf']
+    assert sref_target_ids == sorted(sref_target_ids)
+    sref_by_target = {}
+    for entry in srefs:
+        sref_by_target.setdefault(cell_names[entry['target']], []).append(entry)
+    assert [entry['invert_y'] for entry in sref_by_target['child']] == [True]
+    assert [entry['scale'] for entry in sref_by_target['child']] == pytest.approx([1.1])
+    assert len(sref_by_target['leaf']) == 2
+
+    aref_target_ids = [entry['target'] for entry in arefs]
+    aref_targets = [cell_names[target] for target in aref_target_ids]
+    assert sorted(aref_targets) == ['child', 'leaf', 'leaf']
+    assert aref_target_ids == sorted(aref_target_ids)
+    aref_by_target = {}
+    for entry in arefs:
+        aref_by_target.setdefault(cell_names[entry['target']], []).append(entry)
+    assert [entry['invert_y'] for entry in aref_by_target['child']] == [True]
+    assert [entry['scale'] for entry in aref_by_target['child']] == pytest.approx([1.2])
+    assert len(aref_by_target['leaf']) == 2
+
+    assert len(sref_props) == 1
+    assert cell_names[sref_props[0]['target']] == 'leaf'
+    assert sref_props[0]['properties'][0]['value'] == 'fanout-sref'
+
+    assert len(aref_props) == 1
+    assert cell_names[aref_props[0]['target']] == 'child'
+    assert aref_props[0]['properties'][0]['value'] == 'fanout-aref'
+
+
+def test_gdsii_arrow_invalid_path_type_matches_gdsii(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'invalid_path_type.gds'
+    _write_invalid_path_type_fixture(gds_file)
+
+    with pytest.raises(PatternError, match='Unrecognized path type: 3'):
+        gdsii.readfile(gds_file)
+
+    with pytest.raises(PatternError, match='Unrecognized path type: 3'):
+        gdsii_arrow.readfile(gds_file)
+
+
+def test_raw_ref_grid_label_constructors_match_public() -> None:
+    raw_grid = Grid._from_raw(
+        a_vector=numpy.array([20, 0]),
+        a_count=3,
+        b_vector=numpy.array([0, 30]),
+        b_count=2,
+        )
+    public_grid = Grid(a_vector=(20, 0), a_count=3, b_vector=(0, 30), b_count=2)
+    assert raw_grid == public_grid
+
+    raw_poly = Polygon._from_raw(
+        vertices=numpy.array([[0.0, 0.0], [5.0, 0.0], [5.0, 5.0], [0.0, 5.0]]),
+        annotations={'1': ['poly']},
+        )
+    public_poly = Polygon(
+        vertices=[[0, 0], [5, 0], [5, 5], [0, 5]],
+        annotations={'1': ['poly']},
+        )
+    assert raw_poly == public_poly
+
+    raw_poly_collection = PolyCollection._from_raw(
+        vertex_lists=numpy.array([
+            [0.0, 0.0], [2.0, 0.0], [2.0, 2.0],
+            [10.0, 10.0], [12.0, 10.0], [12.0, 12.0],
+            ]),
+        vertex_offsets=numpy.array([0, 3], dtype=numpy.uint32),
+        annotations={'2': ['pc']},
+        )
+    public_poly_collection = PolyCollection(
+        vertex_lists=[[0, 0], [2, 0], [2, 2], [10, 10], [12, 10], [12, 12]],
+        vertex_offsets=[0, 3],
+        annotations={'2': ['pc']},
+        )
+    assert raw_poly_collection == public_poly_collection
+    assert [tuple(s.indices(len(raw_poly_collection.vertex_lists))) for s in raw_poly_collection.vertex_slices] == [(0, 3, 1), (3, 6, 1)]
+
+    raw_rect_collection = RectCollection._from_raw(
+        rects=numpy.array([[10.0, 10.0, 12.0, 12.0], [0.0, 0.0, 5.0, 5.0]]),
+        annotations={'3': ['rects']},
+        )
+    public_rect_collection = RectCollection(
+        rects=[[0, 0, 5, 5], [10, 10, 12, 12]],
+        annotations={'3': ['rects']},
+        )
+    assert raw_rect_collection == public_rect_collection
+
+    raw_ref_empty = Ref._from_raw(
+        offset=numpy.array([100, 200]),
+        rotation=numpy.pi / 2,
+        mirrored=False,
+        scale=1.0,
+        repetition=None,
+        annotations=None,
+        )
+    public_ref_empty = Ref(
+        offset=(100, 200),
+        rotation=numpy.pi / 2,
+        mirrored=False,
+        scale=1.0,
+        repetition=None,
+        annotations=None,
+        )
+    assert raw_ref_empty.annotations is None
+    assert raw_ref_empty == public_ref_empty
+
+    raw_ref = Ref._from_raw(
+        offset=numpy.array([100, 200]),
+        rotation=numpy.pi / 2,
+        mirrored=True,
+        scale=1.25,
+        repetition=raw_grid,
+        annotations={'12': ['child-ref']},
+        )
+    public_ref = Ref(
+        offset=(100, 200),
+        rotation=numpy.pi / 2,
+        mirrored=True,
+        scale=1.25,
+        repetition=public_grid,
+        annotations={'12': ['child-ref']},
+        )
+    assert raw_ref == public_ref
+    assert numpy.array_equal(raw_ref.as_transforms(), public_ref.as_transforms())
+
+    raw_label_empty = Label._from_raw(
+        'LEAF',
+        offset=numpy.array([3, 4]),
+        annotations=None,
+        )
+    public_label_empty = Label(
+        'LEAF',
+        offset=(3, 4),
+        annotations=None,
+        )
+    assert raw_label_empty.annotations is None
+    assert raw_label_empty == public_label_empty
+
+    raw_label = Label._from_raw(
+        'LEAF',
+        offset=numpy.array([3, 4]),
+        annotations={'10': ['leaf-label']},
+        )
+    public_label = Label(
+        'LEAF',
+        offset=(3, 4),
+        annotations={'10': ['leaf-label']},
+        )
+    assert raw_label == public_label
+    assert numpy.array_equal(raw_label.get_bounds_single(), public_label.get_bounds_single())

masque/test/test_gdsii_lazy.py

@@ -0,0 +1,131 @@
+from pathlib import Path
+
+import numpy
+import pytest
+from numpy.testing import assert_allclose
+
+from ..file import gdsii, gdsii_lazy
+from ..pattern import Pattern
+from ..library import Library
+
+
+def _make_lazy_port_library() -> Library:
+    lib = Library()
+
+    leaf = Pattern()
+    leaf.label(layer=(10, 0), string='A:type1 0', offset=(5, 0))
+    lib['leaf'] = leaf
+
+    child = Pattern()
+    child.ref('leaf', offset=(10, 20), rotation=numpy.pi / 2)
+    lib['child'] = child
+
+    top = Pattern()
+    top.ref('child', offset=(100, 200))
+    lib['top'] = top
+
+    return lib
+
+
+def test_gdsii_lazy_source_exposes_order_and_graph_without_materializing(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'lazy_source.gds'
+    src = _make_lazy_port_library()
+    gdsii.writefile(src, gds_file, meters_per_unit=1e-9, library_name='classic-lazy')
+
+    lib, info = gdsii_lazy.readfile(gds_file)
+
+    assert info['name'] == 'classic-lazy'
+    assert lib.source_order() == ('leaf', 'child', 'top')
+    assert lib.child_graph(dangling='ignore') == {
+        'leaf': set(),
+        'child': {'leaf'},
+        'top': {'child'},
+    }
+    assert not lib._cache
+
+    child = lib['child']
+    assert list(child.refs.keys()) == ['leaf']
+    assert set(lib._cache) == {'child'}
+
+
+def test_gdsii_lazy_ports_view_keeps_raw_source_unmodified(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'lazy_ports.gds'
+    src = _make_lazy_port_library()
+    gdsii.writefile(src, gds_file, meters_per_unit=1e-9, library_name='classic-ports')
+
+    raw, _ = gdsii_lazy.readfile(gds_file)
+    processed = raw.with_ports_from_data(layers=[(10, 0)], max_depth=2)
+
+    top = processed['top']
+    assert set(top.ports) == {'A'}
+    assert_allclose(top.ports['A'].offset, [110, 225], atol=1e-10)
+    assert not raw._cache
+
+    raw_top = raw['top']
+    assert not raw_top.ports
+
+
+def test_gdsii_lazy_overlay_add_source_stays_lazy_for_processed_view(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'lazy_overlay.gds'
+    src = _make_lazy_port_library()
+    gdsii.writefile(src, gds_file, meters_per_unit=1e-9, library_name='classic-overlay')
+
+    raw, _ = gdsii_lazy.readfile(gds_file)
+    processed = raw.with_ports_from_data(layers=[(10, 0)], max_depth=2)
+
+    overlay = gdsii_lazy.OverlayLibrary()
+    overlay.add_source(processed)
+
+    assert not raw._cache
+    assert not processed._cache
+
+    abstract = overlay.abstract('top')
+    assert set(abstract.ports) == {'A'}
+
+
+def test_gdsii_lazy_overlay_add_source_can_rename_every_source_cell() -> None:
+    src = _make_lazy_port_library()
+    overlay = gdsii_lazy.OverlayLibrary()
+
+    rename_map = overlay.add_source(
+        src,
+        rename_theirs=lambda _lib, name: f'mapped_{name}',
+        rename_when='always',
+    )
+
+    assert rename_map == {
+        'leaf': 'mapped_leaf',
+        'child': 'mapped_child',
+        'top': 'mapped_top',
+    }
+    assert tuple(overlay.keys()) == ('mapped_leaf', 'mapped_child', 'mapped_top')
+    assert 'mapped_leaf' in overlay['mapped_child'].refs
+
+
+def test_gdsii_lazy_overlay_add_source_rename_when_validation() -> None:
+    src = _make_lazy_port_library()
+
+    with pytest.raises(TypeError, match='rename_theirs'):
+        gdsii_lazy.OverlayLibrary().add_source(src, rename_when='always')
+
+    with pytest.raises(ValueError, match='rename mode'):
+        gdsii_lazy.OverlayLibrary().add_source(src, rename_when='sometimes')   # type: ignore[arg-type]
+
+
+def test_gdsii_lazy_processed_write_roundtrips_without_explicit_units(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'lazy_roundtrip.gds'
+    src = _make_lazy_port_library()
+    gdsii.writefile(src, gds_file, meters_per_unit=1e-9, library_name='classic-roundtrip')
+
+    raw, _ = gdsii_lazy.readfile(gds_file)
+    processed = raw.with_ports_from_data(layers=[(10, 0)], max_depth=2)
+
+    out_file = tmp_path / 'lazy_roundtrip_out.gds'
+    gdsii_lazy.writefile(processed, out_file)
+
+    assert out_file.read_bytes() == gds_file.read_bytes()
+
+
+def test_gdsii_removed_closure_based_lazy_loader() -> None:
+    assert not hasattr(gdsii, 'load_library')
+    assert not hasattr(gdsii, 'load_libraryfile')

masque/test/test_gdsii_lazy_arrow.py

@@ -0,0 +1,334 @@
+from pathlib import Path
+import subprocess
+import sys
+import textwrap
+
+import klamath
+import numpy
+import pytest
+
+pytest.importorskip('pyarrow')
+
+from .. import PatternError
+from ..library import Library
+from ..pattern import Pattern
+from ..repetition import Grid
+from ..file import gdsii, gdsii_lazy_arrow
+from ..file.gdsii_perf import write_fixture
+
+
+if not gdsii_lazy_arrow.is_available():
+    pytest.skip('klamath_rs_ext shared library is not available', allow_module_level=True)
+
+
+def _make_small_library() -> Library:
+    lib = Library()
+
+    leaf = Pattern()
+    leaf.polygon((1, 0), vertices=[[0, 0], [10, 0], [10, 5], [0, 5]])
+    lib['leaf'] = leaf
+
+    mid = Pattern()
+    mid.ref('leaf', offset=(10, 20))
+    mid.ref('leaf', offset=(40, 0), repetition=Grid(a_vector=(12, 0), a_count=2, b_vector=(0, 9), b_count=2))
+    lib['mid'] = mid
+
+    top = Pattern()
+    top.ref('mid', offset=(100, 200))
+    lib['top'] = top
+    return lib
+
+
+def _make_complex_ref_library() -> Library:
+    lib = Library()
+
+    leaf = Pattern()
+    leaf.polygon((1, 0), vertices=[[0, 0], [10, 0], [10, 10], [0, 10]])
+    lib['leaf'] = leaf
+
+    child = Pattern()
+    child.ref('leaf', offset=(100, 200), rotation=numpy.pi / 2, mirrored=True, scale=1.25)
+    lib['child'] = child
+
+    sibling = Pattern()
+    sibling.ref(
+        'leaf',
+        offset=(-50, 60),
+        repetition=Grid(a_vector=(20, 0), a_count=3, b_vector=(0, 30), b_count=2),
+        )
+    lib['sibling'] = sibling
+
+    fanout = Pattern()
+    fanout.ref('leaf', offset=(0, 0))
+    fanout.ref('child', offset=(10, 0), mirrored=True, rotation=numpy.pi / 6, scale=1.1)
+    fanout.ref('leaf', offset=(30, 0), repetition=Grid(a_vector=(5, 0), a_count=2, b_vector=(0, 7), b_count=3))
+    fanout.ref(
+        'child',
+        offset=(40, 0),
+        mirrored=True,
+        rotation=numpy.pi / 4,
+        scale=1.2,
+        repetition=Grid(a_vector=(9, 0), a_count=2, b_vector=(0, 11), b_count=2),
+        )
+    lib['fanout'] = fanout
+
+    top = Pattern()
+    top.ref('child', offset=(500, 600))
+    top.ref('sibling', offset=(-100, 50), rotation=numpy.pi)
+    top.ref('fanout', offset=(250, -75))
+    lib['top'] = top
+
+    return lib
+
+
+def _write_invalid_path_type_fixture(path: Path) -> None:
+    with path.open('wb') as stream:
+        header = klamath.library.FileHeader(
+            name=b'test',
+            user_units_per_db_unit=1.0,
+            meters_per_db_unit=1e-9,
+        )
+        header.write(stream)
+        elem = klamath.elements.Path(
+            layer=(1, 0),
+            path_type=3,
+            width=10,
+            extension=(0, 0),
+            xy=numpy.array([[0, 0], [10, 0]], dtype=numpy.int32),
+            properties={},
+        )
+        klamath.library.write_struct(stream, name=b'top', elements=[elem])
+        klamath.records.ENDLIB.write(stream, None)
+
+
+def _transform_rows_key(values: numpy.ndarray) -> tuple[tuple[object, ...], ...]:
+    arr = numpy.asarray(values, dtype=float)
+    arr = numpy.atleast_2d(arr)
+    rows = [
+        (
+            round(float(row[0]), 8),
+            round(float(row[1]), 8),
+            round(float(row[2]), 8),
+            bool(int(round(float(row[3])))),
+            round(float(row[4]), 8),
+            )
+        for row in arr
+        ]
+    return tuple(sorted(rows))
+
+
+def _local_refs_key(refs: dict[str, list[numpy.ndarray]]) -> dict[str, tuple[tuple[object, ...], ...]]:
+    return {
+        parent: _transform_rows_key(numpy.concatenate(transforms))
+        for parent, transforms in refs.items()
+        }
+
+
+def _global_refs_key(refs: dict[tuple[str, ...], numpy.ndarray]) -> dict[tuple[str, ...], tuple[tuple[object, ...], ...]]:
+    return {
+        path: _transform_rows_key(transforms)
+        for path, transforms in refs.items()
+        }
+
+
+def test_gdsii_lazy_arrow_loads_perf_fixture(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'many_cells_lazy.gds'
+    manifest = write_fixture(gds_file, preset='many_cells', scale=0.001)
+
+    lib, info = gdsii_lazy_arrow.readfile(gds_file)
+
+    assert info['name'] == manifest.library_name
+    assert len(lib) == manifest.cells
+    assert lib.top() == 'TOP'
+    assert 'TOP' in lib.child_graph(dangling='ignore')
+
+
+def test_gdsii_lazy_arrow_local_and_global_refs(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'refs.gds'
+    src = _make_small_library()
+    gdsii.writefile(src, gds_file, meters_per_unit=1e-9, library_name='lazy-refs')
+
+    lib, _ = gdsii_lazy_arrow.readfile(gds_file)
+
+    local = lib.find_refs_local('leaf')
+    assert set(local) == {'mid'}
+    assert sum(arr.shape[0] for arr in local['mid']) == 5
+
+    global_refs = lib.find_refs_global('leaf')
+    assert {path for path in global_refs} == {('top', 'mid', 'leaf')}
+    assert global_refs[('top', 'mid', 'leaf')].shape[0] == 5
+
+
+def test_gdsii_lazy_arrow_ref_queries_match_eager_reader(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'complex_refs.gds'
+    src = _make_complex_ref_library()
+    gdsii.writefile(src, gds_file, meters_per_unit=1e-9, library_name='lazy-complex-refs')
+
+    eager, _ = gdsii.readfile(gds_file)
+    lazy, _ = gdsii_lazy_arrow.readfile(gds_file)
+
+    for name in ('leaf', 'child'):
+        assert _local_refs_key(lazy.find_refs_local(name)) == _local_refs_key(eager.find_refs_local(name))
+        assert _global_refs_key(lazy.find_refs_global(name)) == _global_refs_key(eager.find_refs_global(name))
+
+
+def test_gdsii_lazy_arrow_invalid_input_raises_klamath_error(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'invalid.gds'
+    gds_file.write_bytes(b'not-a-gds')
+
+    script = textwrap.dedent(f"""
+        from masque.file import gdsii_lazy_arrow
+        try:
+            gdsii_lazy_arrow.readfile({str(gds_file)!r})
+        except Exception as exc:
+            print(type(exc).__module__)
+            print(type(exc).__qualname__)
+            print(exc)
+        else:
+            raise SystemExit('expected gdsii_lazy_arrow.readfile() to fail')
+        """)
+    result = subprocess.run([sys.executable, '-c', script], capture_output=True, text=True, check=False)
+
+    assert result.returncode == 0, result.stderr
+    assert 'klamath.basic' in result.stdout
+    assert 'KlamathError' in result.stdout
+
+
+def test_gdsii_lazy_arrow_invalid_path_type_raises_pattern_error(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'invalid_path_type.gds'
+    _write_invalid_path_type_fixture(gds_file)
+
+    lib, _ = gdsii_lazy_arrow.readfile(gds_file)
+
+    with pytest.raises(PatternError, match='Unrecognized path type: 3'):
+        lib['top']
+
+
+def test_gdsii_lazy_arrow_untouched_write_is_copy_through(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'copy_source.gds'
+    src = _make_small_library()
+    gdsii.writefile(src, gds_file, meters_per_unit=1e-9, library_name='copy-through')
+
+    lib, info = gdsii_lazy_arrow.readfile(gds_file)
+    out_file = tmp_path / 'copy_out.gds'
+    gdsii_lazy_arrow.writefile(
+        lib,
+        out_file,
+        meters_per_unit=info['meters_per_unit'],
+        logical_units_per_unit=info['logical_units_per_unit'],
+        library_name=info['name'],
+    )
+
+    assert out_file.read_bytes() == gds_file.read_bytes()
+
+
+def test_gdsii_lazy_arrow_gzipped_copy_through(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'copy_source.gds.gz'
+    src = _make_small_library()
+    gdsii.writefile(src, gds_file, meters_per_unit=1e-9, library_name='copy-through-gz')
+
+    lib, info = gdsii_lazy_arrow.readfile(gds_file)
+    out_file = tmp_path / 'copy_out.gds.gz'
+    gdsii_lazy_arrow.writefile(
+        lib,
+        out_file,
+        meters_per_unit=info['meters_per_unit'],
+        logical_units_per_unit=info['logical_units_per_unit'],
+        library_name=info['name'],
+    )
+
+    assert out_file.read_bytes() == gds_file.read_bytes()
+
+
+def test_gdsii_lazy_overlay_merge_and_write(tmp_path: Path) -> None:
+    base_a = Library()
+    leaf_a = Pattern()
+    leaf_a.polygon((1, 0), vertices=[[0, 0], [8, 0], [8, 8], [0, 8]])
+    base_a['leaf'] = leaf_a
+    top_a = Pattern()
+    top_a.ref('leaf', offset=(0, 0))
+    base_a['top_a'] = top_a
+
+    base_b = Library()
+    leaf_b = Pattern()
+    leaf_b.polygon((2, 0), vertices=[[0, 0], [5, 0], [5, 5], [0, 5]])
+    base_b['leaf'] = leaf_b
+    top_b = Pattern()
+    top_b.ref('leaf', offset=(20, 30))
+    base_b['top_b'] = top_b
+
+    gds_a = tmp_path / 'a.gds'
+    gds_b = tmp_path / 'b.gds'
+    gdsii.writefile(base_a, gds_a, meters_per_unit=1e-9, library_name='overlay')
+    gdsii.writefile(base_b, gds_b, meters_per_unit=1e-9, library_name='overlay')
+
+    lib_a, _ = gdsii_lazy_arrow.readfile(gds_a)
+    lib_b, _ = gdsii_lazy_arrow.readfile(gds_b)
+
+    overlay = gdsii_lazy_arrow.OverlayLibrary()
+    overlay.add_source(lib_a)
+    rename_map = overlay.add_source(lib_b, rename_theirs=lambda lib, name: lib.get_name(name))
+    renamed_leaf = rename_map['leaf']
+
+    assert rename_map == {'leaf': renamed_leaf}
+    assert renamed_leaf != 'leaf'
+    assert len(lib_a._cache) == 0
+    assert len(lib_b._cache) == 0
+
+    overlay.move_references('leaf', renamed_leaf)
+
+    out_file = tmp_path / 'overlay_out.gds'
+    gdsii_lazy_arrow.writefile(overlay, out_file)
+
+    roundtrip, _ = gdsii.readfile(out_file)
+    assert set(roundtrip.keys()) == {'leaf', renamed_leaf, 'top_a', 'top_b'}
+    assert 'top_b' in roundtrip
+    assert list(roundtrip['top_b'].refs.keys()) == [renamed_leaf]
+
+
+def test_gdsii_writer_accepts_overlay_library(tmp_path: Path) -> None:
+    gds_file = tmp_path / 'overlay_source.gds'
+    src = _make_small_library()
+    gdsii.writefile(src, gds_file, meters_per_unit=1e-9, library_name='overlay-src')
+
+    lib, info = gdsii_lazy_arrow.readfile(gds_file)
+
+    overlay = gdsii_lazy_arrow.OverlayLibrary()
+    overlay.add_source(lib)
+    overlay.rename('leaf', 'leaf_copy', move_references=True)
+
+    out_file = tmp_path / 'overlay_via_eager_writer.gds'
+    gdsii.writefile(
+        overlay,
+        out_file,
+        meters_per_unit=info['meters_per_unit'],
+        logical_units_per_unit=info['logical_units_per_unit'],
+        library_name=info['name'],
+    )
+
+    roundtrip, _ = gdsii.readfile(out_file)
+    assert set(roundtrip.keys()) == {'leaf_copy', 'mid', 'top'}
+    assert list(roundtrip['mid'].refs.keys()) == ['leaf_copy']
+
+
+def test_svg_writer_uses_detached_materialized_copy(tmp_path: Path) -> None:
+    pytest.importorskip('svgwrite')
+    from ..file import svg
+    from ..shapes import Path as MPath
+
+    gds_file = tmp_path / 'svg_source.gds'
+    src = _make_small_library()
+    src['top'].path((3, 0), vertices=[[0, 0], [0, 20]], width=4)
+    gdsii.writefile(src, gds_file, meters_per_unit=1e-9, library_name='svg-src')
+
+    lib, _ = gdsii_lazy_arrow.readfile(gds_file)
+    top_pat = lib['top']
+    assert list(top_pat.refs.keys()) == ['mid']
+    assert any(isinstance(shape, MPath) for shape in top_pat.shapes[(3, 0)])
+
+    svg_path = tmp_path / 'lazy.svg'
+    svg.writefile(lib, 'top', str(svg_path))
+
+    assert svg_path.exists()
+    assert list(top_pat.refs.keys()) == ['mid']
+    assert any(isinstance(shape, MPath) for shape in top_pat.shapes[(3, 0)])

masque/test/test_gdsii_perf.py

@@ -0,0 +1,24 @@
+from dataclasses import asdict
+import json
+from pathlib import Path
+
+from ..file import gdsii
+from ..file.gdsii_perf import fixture_manifest, write_fixture
+
+
+def test_gdsii_perf_fixture_smoke(tmp_path: Path) -> None:
+    output = tmp_path / 'many_cells.gds'
+    manifest = write_fixture(output, preset='many_cells', scale=0.002)
+    expected = fixture_manifest(output, preset='many_cells', scale=0.002)
+
+    assert output.exists()
+    assert manifest == expected
+
+    sidecar = json.loads(output.with_suffix('.gds.json').read_text())
+    assert sidecar == asdict(manifest)
+
+    read_lib, info = gdsii.readfile(output)
+    assert info['name'] == manifest.library_name
+    assert len(read_lib) == manifest.cells
+    assert 'TOP' in read_lib
+    assert len(read_lib['TOP'].refs) > 0

masque/test/test_pather_core.py

@@ -1,13 +1,11 @@
-from typing import Any
-
 import pytest
 import numpy
 from numpy import pi
 from numpy.testing import assert_allclose, assert_equal
 
 from masque import Pather, Library, Pattern, Port
-from masque.builder.tools import PathTool, Tool
+from masque.builder.tools import PathTool
-from masque.error import BuildError, PortError, PatternError
+from masque.error import BuildError, PortError
 
 
 @pytest.fixture
@@ -117,6 +115,82 @@ def test_pather_bundle_trace() -> None:
     assert numpy.isclose(p.pattern.ports['A'].offset[0], -20000)
     assert numpy.isclose(p.pattern.ports['B'].offset[0], -22000)
 
+def test_portpather_default_spacing_matches_explicit_spacing() -> None:
+    lib_default = Library()
+    tool_default = PathTool(layer='M1', width=1000)
+    p_default = Pather(lib_default, tools=tool_default, auto_render=False)
+    p_default.pattern.ports['A'] = Port((0, 0), rotation=0)
+    p_default.pattern.ports['B'] = Port((0, 2000), rotation=0)
+
+    lib_explicit = Library()
+    tool_explicit = PathTool(layer='M1', width=1000)
+    p_explicit = Pather(lib_explicit, tools=tool_explicit, auto_render=False)
+    p_explicit.pattern.ports['A'] = Port((0, 0), rotation=0)
+    p_explicit.pattern.ports['B'] = Port((0, 2000), rotation=0)
+
+    p_default.at(['A', 'B'], spacing=2000).ccw(xmin=-20000)
+    p_explicit.at(['A', 'B']).ccw(xmin=-20000, spacing=2000)
+
+    assert_allclose(p_default.pattern.ports['A'].offset, p_explicit.pattern.ports['A'].offset)
+    assert_allclose(p_default.pattern.ports['B'].offset, p_explicit.pattern.ports['B'].offset)
+
+def test_portpather_default_spacing_reused_and_overridden() -> None:
+    p_default = Pather(Library(), tools=PathTool(layer='M1', width=1000), auto_render=False)
+    p_default.pattern.ports['A'] = Port((0, 0), rotation=0)
+    p_default.pattern.ports['B'] = Port((0, 2000), rotation=0)
+
+    p_explicit = Pather(Library(), tools=PathTool(layer='M1', width=1000), auto_render=False)
+    p_explicit.pattern.ports['A'] = Port((0, 0), rotation=0)
+    p_explicit.pattern.ports['B'] = Port((0, 2000), rotation=0)
+
+    pp_default = p_default.at(['A', 'B'], spacing=2000)
+    pp_default.ccw(xmin=-20000)
+    pp_default.cw(emin=1000)
+    p_explicit.at(['A', 'B']).ccw(xmin=-20000, spacing=2000).cw(emin=1000, spacing=2000)
+
+    assert_allclose(p_default.pattern.ports['A'].offset, p_explicit.pattern.ports['A'].offset)
+    assert_allclose(p_default.pattern.ports['B'].offset, p_explicit.pattern.ports['B'].offset)
+
+    p_override = Pather(Library(), tools=PathTool(layer='M1', width=1000), auto_render=False)
+    p_override.pattern.ports['A'] = Port((0, 0), rotation=0)
+    p_override.pattern.ports['B'] = Port((0, 2000), rotation=0)
+
+    p_override_explicit = Pather(Library(), tools=PathTool(layer='M1', width=1000), auto_render=False)
+    p_override_explicit.pattern.ports['A'] = Port((0, 0), rotation=0)
+    p_override_explicit.pattern.ports['B'] = Port((0, 2000), rotation=0)
+
+    p_override.at(['A', 'B'], spacing=2000).ccw(xmin=-20000, spacing=3000)
+    p_override_explicit.at(['A', 'B']).ccw(xmin=-20000, spacing=3000)
+
+    assert_allclose(p_override.pattern.ports['A'].offset, p_override_explicit.pattern.ports['A'].offset)
+    assert_allclose(p_override.pattern.ports['B'].offset, p_override_explicit.pattern.ports['B'].offset)
+
+def test_portpather_default_spacing_not_injected_for_straight_bundle() -> None:
+    lib = Library()
+    tool = PathTool(layer='M1', width=1000)
+    p = Pather(lib, tools=tool, auto_render=False)
+    p.pattern.ports['A'] = Port((0, 0), rotation=0)
+    p.pattern.ports['B'] = Port((0, 2000), rotation=0)
+
+    p.at(['A', 'B'], spacing=2000).straight(xmin=-10000)
+
+    assert numpy.isclose(p.pattern.ports['A'].offset[0], -10000)
+    assert numpy.isclose(p.pattern.ports['B'].offset[0], -10000)
+
+def test_portpather_default_spacing_vector_revalidated_after_selection_change() -> None:
+    lib = Library()
+    tool = PathTool(layer='M1', width=1000)
+    p = Pather(lib, tools=tool, auto_render=False)
+    p.pattern.ports['A'] = Port((0, 0), rotation=0)
+    p.pattern.ports['B'] = Port((0, 2000), rotation=0)
+    p.pattern.ports['C'] = Port((0, 4000), rotation=0)
+
+    pp = p.at(['A', 'B', 'C'], spacing=[2000, 3000])
+    pp.deselect('C')
+
+    with pytest.raises(BuildError, match='spacing must be scalar or have length 1'):
+        pp.ccw(xmin=-20000)
+
 def test_pather_each_bound() -> None:
     lib = Library()
     tool = PathTool(layer='M1', width=1000)

masque/test/test_raw_constructors.py

@@ -0,0 +1,97 @@
+import numpy
+from numpy import pi
+from numpy.testing import assert_allclose
+
+from ..shapes import Arc, Circle, Ellipse, Path, Text
+
+
+def test_circle_raw_constructor_matches_public() -> None:
+    raw = Circle._from_raw(
+        radius=5.0,
+        offset=numpy.array([1.0, 2.0]),
+        annotations={'1': ['circle']},
+        )
+    public = Circle(
+        radius=5.0,
+        offset=(1.0, 2.0),
+        annotations={'1': ['circle']},
+        )
+    assert raw == public
+
+
+def test_ellipse_raw_constructor_matches_public() -> None:
+    raw = Ellipse._from_raw(
+        radii=numpy.array([3.0, 5.0]),
+        offset=numpy.array([1.0, 2.0]),
+        rotation=5 * pi / 2,
+        annotations={'2': ['ellipse']},
+        )
+    public = Ellipse(
+        radii=(3.0, 5.0),
+        offset=(1.0, 2.0),
+        rotation=5 * pi / 2,
+        annotations={'2': ['ellipse']},
+        )
+    assert raw == public
+
+
+def test_arc_raw_constructor_matches_public() -> None:
+    raw = Arc._from_raw(
+        radii=numpy.array([10.0, 6.0]),
+        angles=numpy.array([0.0, pi / 2]),
+        width=2.0,
+        offset=numpy.array([1.0, 2.0]),
+        rotation=5 * pi / 2,
+        annotations={'3': ['arc']},
+        )
+    public = Arc(
+        radii=(10.0, 6.0),
+        angles=(0.0, pi / 2),
+        width=2.0,
+        offset=(1.0, 2.0),
+        rotation=5 * pi / 2,
+        annotations={'3': ['arc']},
+        )
+    assert raw == public
+
+
+def test_path_raw_constructor_matches_public() -> None:
+    raw = Path._from_raw(
+        vertices=numpy.array([[0.0, 0.0], [10.0, 0.0], [10.0, 5.0]]),
+        width=2.0,
+        cap=Path.Cap.SquareCustom,
+        cap_extensions=numpy.array([1.0, 3.0]),
+        annotations={'4': ['path']},
+        )
+    public = Path(
+        vertices=((0.0, 0.0), (10.0, 0.0), (10.0, 5.0)),
+        width=2.0,
+        cap=Path.Cap.SquareCustom,
+        cap_extensions=(1.0, 3.0),
+        annotations={'4': ['path']},
+        )
+    assert raw == public
+    assert raw.cap_extensions is not None
+    assert_allclose(raw.cap_extensions, [1.0, 3.0])
+
+
+def test_text_raw_constructor_matches_public() -> None:
+    raw = Text._from_raw(
+        string='RAW',
+        height=12.0,
+        font_path='font.otf',
+        offset=numpy.array([1.0, 2.0]),
+        rotation=5 * pi / 2,
+        mirrored=True,
+        annotations={'5': ['text']},
+        )
+    public = Text(
+        string='RAW',
+        height=12.0,
+        font_path='font.otf',
+        offset=(1.0, 2.0),
+        rotation=5 * pi / 2,
+        mirrored=True,
+        annotations={'5': ['text']},
+        )
+    assert raw == public

masque/test/test_rect_collection.py

@@ -0,0 +1,70 @@
+import copy
+
+import numpy
+import pytest
+from numpy.testing import assert_allclose, assert_equal
+
+from ..error import PatternError
+from ..shapes import Polygon, RectCollection
+
+
+def test_rect_collection_init_and_to_polygons() -> None:
+    rects = RectCollection([[10, 10, 12, 12], [0, 0, 5, 5]])
+    assert_equal(rects.rects, [[0, 0, 5, 5], [10, 10, 12, 12]])
+
+    polys = rects.to_polygons()
+    assert len(polys) == 2
+    assert all(isinstance(poly, Polygon) for poly in polys)
+    assert_equal(polys[0].vertices, [[0, 0], [0, 5], [5, 5], [5, 0]])
+
+
+def test_rect_collection_rejects_invalid_rects() -> None:
+    with pytest.raises(PatternError):
+        RectCollection([[0, 0, 1]])
+    with pytest.raises(PatternError):
+        RectCollection([[5, 0, 1, 2]])
+    with pytest.raises(PatternError):
+        RectCollection([[0, 5, 1, 2]])
+
+
+def test_rect_collection_raw_constructor_matches_public() -> None:
+    raw = RectCollection._from_raw(
+        rects=numpy.array([[10.0, 10.0, 12.0, 12.0], [0.0, 0.0, 5.0, 5.0]]),
+        annotations={'1': ['rects']},
+        )
+    public = RectCollection(
+        [[0, 0, 5, 5], [10, 10, 12, 12]],
+        annotations={'1': ['rects']},
+        )
+    assert raw == public
+    assert_equal(raw.get_bounds_single(), [[0, 0], [12, 12]])
+
+
+def test_rect_collection_manhattan_transforms() -> None:
+    rects = RectCollection([[0, 0, 2, 4], [10, 20, 12, 22]])
+
+    mirrored = copy.deepcopy(rects).mirror(1)
+    assert_equal(mirrored.rects, [[-2, 0, 0, 4], [-12, 20, -10, 22]])
+
+    scaled = copy.deepcopy(rects).scale_by(-2)
+    assert_equal(scaled.rects, [[-4, -8, 0, 0], [-24, -44, -20, -40]])
+
+    rotated = copy.deepcopy(rects).rotate(numpy.pi / 2)
+    assert_equal(rotated.rects, [[-4, 0, 0, 2], [-22, 10, -20, 12]])
+
+
+def test_rect_collection_non_manhattan_rotation_raises() -> None:
+    rects = RectCollection([[0, 0, 2, 4]])
+    with pytest.raises(PatternError, match='Manhattan rotations'):
+        rects.rotate(numpy.pi / 4)
+
+
+def test_rect_collection_normalized_form_rebuild_is_independent() -> None:
+    rects = RectCollection([[0, 0, 2, 4], [10, 20, 12, 22]])
+    _intrinsic, extrinsic, rebuild = rects.normalized_form(2)
+
+    clone = rebuild()
+    clone.rects[:] = [[1, 1, 2, 2], [3, 3, 4, 4]]
+
+    assert_allclose(extrinsic[0], [6, 11.5])
+    assert_equal(rects.rects, [[0, 0, 2, 4], [10, 20, 12, 22]])

masque/utils/comparisons.py

@@ -9,7 +9,15 @@ def annotation2key(aaa: int | float | str) -> tuple[bool, Any]:
     return (isinstance(aaa, str), aaa)
 
 
+def _normalized_annotations(annotations: annotations_t) -> annotations_t:
+    if not annotations:
+        return None
+    return annotations
+
+
 def annotations_lt(aa: annotations_t, bb: annotations_t) -> bool:
+    aa = _normalized_annotations(aa)
+    bb = _normalized_annotations(bb)
     if aa is None:
         return bb is not None
     elif bb is None:            # noqa: RET505
@@ -36,6 +44,8 @@ def annotations_lt(aa: annotations_t, bb: annotations_t) -> bool:
 
 
 def annotations_eq(aa: annotations_t, bb: annotations_t) -> bool:
+    aa = _normalized_annotations(aa)
+    bb = _normalized_annotations(bb)
     if aa is None:
         return bb is None
     elif bb is None:            # noqa: RET505

pyproject.toml

@@ -44,7 +44,7 @@ dependencies = [
 
 [dependency-groups]
 dev = [
-    "pytest",
+    "masque[arrow]",
     "masque[oasis]",
     "masque[dxf]",
     "masque[svg]",
@@ -52,6 +52,7 @@ dev = [
     "masque[text]",
     "masque[manhattanize]",
     "masque[manhattanize_slow]",
+    "masque[boolean]",
     "matplotlib>=3.10.8",
     "pytest>=9.0.2",
     "ruff>=0.15.5",
@@ -66,6 +67,7 @@ build-backend = "hatchling.build"
 path = "masque/__init__.py"
 
 [project.optional-dependencies]
+arrow = ["pyarrow", "cffi"]
 oasis = ["fatamorgana~=0.11"]
 dxf = ["ezdxf~=1.4"]
 svg = ["svgwrite"]
@@ -121,4 +123,3 @@ mypy_path = "stubs"
 python_version = "3.11"
 strict = false
 check_untyped_defs = true
-