writefile should write to a temporary file first

masque/file/dxf.py

@@ -6,7 +6,8 @@ Notes:
  * ezdxf sets creation time, write time, $VERSIONGUID, and $FINGERPRINTGUID
     to unique values, so byte-for-byte reproducibility is not achievable for now
 """
-from typing import List, Any, Dict, Tuple, Callable, Union, Mapping, TextIO
+from typing import List, Any, Dict, Tuple, Callable, Union, Mapping
+from typing import cast, TextIO, IO
 import io
 import logging
 import pathlib
@@ -15,12 +16,12 @@ import gzip
 import numpy
 import ezdxf
 
+from .utils import is_gzipped, tmpfile
 from .. import Pattern, Ref, PatternError, Label
 from ..library import Library, WrapROLibrary
 from ..shapes import Shape, Polygon, Path
 from ..repetition import Grid
 from ..utils import rotation_matrix_2d, layer_t
-from .utils import is_gzipped
 
 
 logger = logging.getLogger(__name__)
@@ -125,16 +126,16 @@ def writefile(
     """
     path = pathlib.Path(filename)
 
-    streams: Tuple[Any, ...]
+    gz_stream: IO[bytes]
-    stream: TextIO
+    with tmpfile(path) as base_stream:
+        streams: Tuple[Any, ...] = (base_stream,)
         if path.suffix == '.gz':
-        base_stream = open(path, mode='wb')
+            gz_stream = cast(IO[bytes], gzip.GzipFile(filename='', mtime=0, fileobj=base_stream))
-        gz_stream = gzip.GzipFile(filename='', mtime=0, fileobj=base_stream)
+            streams = (gz_stream,) + streams
-        stream = io.TextIOWrapper(gz_stream)        # type: ignore
-        streams = (stream, gz_stream, base_stream)
         else:
-        stream = open(path, mode='wt')
+            gz_stream = base_stream
-        streams = (stream,)
+        stream = io.TextIOWrapper(gz_stream)        # type: ignore
+        streams = (stream,) + streams
 
         try:
             write(library, top_name, stream, *args, **kwargs)

masque/file/gdsii.py

@@ -20,7 +20,7 @@ Notes:
  * Gzip modification time is set to 0 (start of current epoch, usually 1970-01-01)
 """
 from typing import List, Dict, Tuple, Callable, Union, Iterable, Mapping
-from typing import BinaryIO, cast, Optional, Any
+from typing import IO, cast, Optional, Any
 import io
 import mmap
 import logging
@@ -34,7 +34,7 @@ from numpy.typing import ArrayLike, NDArray
 import klamath
 from klamath import records
 
-from .utils import is_gzipped
+from .utils import is_gzipped, tmpfile
 from .. import Pattern, Ref, PatternError, LibraryError, Label, Shape
 from ..shapes import Polygon, Path
 from ..repetition import Grid
@@ -59,7 +59,7 @@ def rint_cast(val: ArrayLike) -> NDArray[numpy.int32]:
 
 def write(
         library: Mapping[str, Pattern],
-        stream: BinaryIO,
+        stream: IO[bytes],
         meters_per_unit: float,
         logical_units_per_unit: float = 1,
         library_name: str = 'masque-klamath',
@@ -142,10 +142,10 @@ def writefile(
     """
     path = pathlib.Path(filename)
 
-    base_stream = open(path, mode='wb')
+    with tmpfile(path) as base_stream:
         streams: Tuple[Any, ...] = (base_stream,)
         if path.suffix == '.gz':
-        stream = cast(BinaryIO, gzip.GzipFile(filename='', mtime=0, fileobj=base_stream))
+            stream = cast(IO[bytes], gzip.GzipFile(filename='', mtime=0, fileobj=base_stream))
             streams = (stream,) + streams
         else:
             stream = base_stream
@@ -184,7 +184,7 @@ def readfile(
 
 
 def read(
-        stream: BinaryIO,
+        stream: IO[bytes],
         raw_mode: bool = True,
         ) -> Tuple[Dict[str, Pattern], Dict[str, Any]]:
     """
@@ -220,7 +220,7 @@ def read(
     return patterns_dict, library_info
 
 
-def _read_header(stream: BinaryIO) -> Dict[str, Any]:
+def _read_header(stream: IO[bytes]) -> Dict[str, Any]:
     """
     Read the file header and create the library_info dict.
     """
@@ -234,7 +234,7 @@ def _read_header(stream: BinaryIO) -> Dict[str, Any]:
 
 
 def read_elements(
-        stream: BinaryIO,
+        stream: IO[bytes],
         raw_mode: bool = True,
         ) -> Pattern:
     """
@@ -509,7 +509,7 @@ def _labels_to_texts(labels: List[Label]) -> List[klamath.elements.Text]:
 
 
 def load_library(
-        stream: BinaryIO,
+        stream: IO[bytes],
         *,
         full_load: bool = False,
         postprocess: Optional[Callable[[Library, str, Pattern], Pattern]] = None
@@ -595,7 +595,7 @@ def load_libraryfile(
         Additional library info (dict, same format as from `read`).
     """
     path = pathlib.Path(filename)
-    stream: BinaryIO
+    stream: IO[bytes]
     if is_gzipped(path):
         if mmap:
             logger.info('Asked to mmap a gzipped file, reading into memory instead...')

masque/file/oasis.py

@@ -15,7 +15,7 @@ Notes:
  * Gzip modification time is set to 0 (start of current epoch, usually 1970-01-01)
 """
 from typing import List, Any, Dict, Tuple, Callable, Union, Iterable
-from typing import BinaryIO, Mapping, Optional, cast, Sequence
+from typing import IO, Mapping, Optional, cast, Sequence
 import logging
 import pathlib
 import gzip
@@ -28,7 +28,7 @@ import fatamorgana
 import fatamorgana.records as fatrec
 from fatamorgana.basic import PathExtensionScheme, AString, NString, PropStringReference
 
-from .utils import is_gzipped
+from .utils import is_gzipped, tmpfile
 from .. import Pattern, Ref, PatternError, LibraryError, Label, Shape
 from ..library import WrapLibrary, MutableLibrary
 from ..shapes import Polygon, Path, Circle
@@ -150,7 +150,7 @@ def build(
 
 def write(
         library: Mapping[str, Pattern],           # NOTE: Pattern here should be treated as immutable!
-        stream: BinaryIO,
+        stream: IO[bytes],
         *args,
         **kwargs,
         ) -> None:
@@ -187,10 +187,10 @@ def writefile(
     """
     path = pathlib.Path(filename)
 
-    base_stream = open(path, mode='wb')
+    with tmpfile(path) as base_stream:
         streams: Tuple[Any, ...] = (base_stream,)
         if path.suffix == '.gz':
-        stream = cast(BinaryIO, gzip.GzipFile(filename='', mtime=0, fileobj=base_stream))
+            stream = cast(IO[bytes], gzip.GzipFile(filename='', mtime=0, fileobj=base_stream))
             streams += (stream,)
         else:
             stream = base_stream
@@ -229,7 +229,7 @@ def readfile(
 
 
 def read(
-        stream: BinaryIO,
+        stream: IO[bytes],
         ) -> Tuple[Dict[str, Pattern], Dict[str, Any]]:
     """
     Read a OASIS file and translate it into a dict of Pattern objects. OASIS cells are

masque/file/utils.py

@@ -1,9 +1,13 @@
 """
 Helper functions for file reading and writing
 """
+from typing import Union, IO, Iterator
 import re
 import pathlib
 import logging
+import tempfile
+import shutil
+from contextlib import contextmanager
 
 from .. import Pattern, PatternError
 from ..shapes import Polygon, Path
@@ -55,3 +59,23 @@ def is_gzipped(path: pathlib.Path) -> bool:
     with open(path, 'rb') as stream:
         magic_bytes = stream.read(2)
         return magic_bytes == b'\x1f\x8b'
+
+
+@contextmanager
+def tmpfile(path: Union[str, pathlib.Path]) -> Iterator[IO[bytes]]:
+    """
+    Context manager which allows you to write to a temporary file,
+    and move that file into its final location only after the write
+    has finished.
+    """
+    path = pathlib.Path(path)
+    suffixes = ''.join(path.suffixes)
+    with tempfile.NamedTemporaryFile(suffix=suffixes, delete=False) as tmp_stream:
+        yield tmp_stream
+
+    try:
+        shutil.move(tmp_stream.name, path)
+    finally:
+        pathlib.Path(tmp_stream.name).unlink(missing_ok=True)
+
+