[wip] add poly_collection shape
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								masque/shapes/poly_collection.py
									
									
									
									
									
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								masque/shapes/poly_collection.py
									
									
									
									
									
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							| @ -0,0 +1,210 @@ | |||||||
|  | from typing import Any, cast, Iterable | ||||||
|  | from collections.abc import Sequence | ||||||
|  | import copy | ||||||
|  | import functools | ||||||
|  | 
 | ||||||
|  | import numpy | ||||||
|  | from numpy import pi | ||||||
|  | from numpy.typing import NDArray, ArrayLike | ||||||
|  | 
 | ||||||
|  | from . import Shape, normalized_shape_tuple | ||||||
|  | from ..error import PatternError | ||||||
|  | from ..repetition import Repetition | ||||||
|  | from ..utils import is_scalar, rotation_matrix_2d, annotations_lt, annotations_eq, rep2key | ||||||
|  | from ..utils import remove_colinear_vertices, remove_duplicate_vertices, annotations_t | ||||||
|  | 
 | ||||||
|  | 
 | ||||||
|  | @functools.total_ordering | ||||||
|  | class PolyCollection(Shape): | ||||||
|  |     """ | ||||||
|  |     A collection of polygons, consisting of list of vertex arrays (N_m x 2 ndarrays) which specify | ||||||
|  |        implicitly-closed boundaries, and an offset. | ||||||
|  | 
 | ||||||
|  |     Note that the setter for `PolyCollection.vertex_list` creates a copy of the | ||||||
|  |       passed vertex coordinates. | ||||||
|  | 
 | ||||||
|  |     A `normalized_form(...)` is available, but can be quite slow with lots of vertices. | ||||||
|  |     """ | ||||||
|  |     __slots__ = ( | ||||||
|  |         '_vertex_lists', | ||||||
|  |         # Inherited | ||||||
|  |         '_offset', '_repetition', '_annotations', | ||||||
|  |         ) | ||||||
|  | 
 | ||||||
|  |     _vertex_lists: list[NDArray[numpy.float64]] | ||||||
|  |     """ List of ndarrays (N_m x 2)  of vertices `[ [[x0, y0], [x1, y1], ...] ]` """ | ||||||
|  | 
 | ||||||
|  |     # vertex_lists property | ||||||
|  |     @property | ||||||
|  |     def vertex_lists(self) -> Any:        # mypy#3004   NDArray[numpy.float64]: | ||||||
|  |         """ | ||||||
|  |         Vertices of the polygons (ist of ndarrays (N_m x 2) `[ [[x0, y0], [x1, y1], ...] ]` | ||||||
|  | 
 | ||||||
|  |         When setting, note that a copy will be made, | ||||||
|  |         """ | ||||||
|  |         return self._vertex_lists | ||||||
|  | 
 | ||||||
|  |     @vertex_lists.setter | ||||||
|  |     def vertex_lists(self, val: ArrayLike) -> None: | ||||||
|  |         val = [numpy.array(vv, dtype=float) for vv in val] | ||||||
|  |         for ii, vv in enumerate(val): | ||||||
|  |             if len(vv.shape) < 2 or vv.shape[1] != 2: | ||||||
|  |                 raise PatternError(f'vertex_lists contents must be an Nx2 arrays (polygon #{ii} fails)') | ||||||
|  |             if vv.shape[0] < 3: | ||||||
|  |                 raise PatternError(f'vertex_lists contents must have at least 3 vertices (Nx2 where N>2) (polygon ${ii} has shape {vv.shape})') | ||||||
|  |         self._vertices = val | ||||||
|  | 
 | ||||||
|  |     # xs property | ||||||
|  |     @property | ||||||
|  |     def xs(self) -> NDArray[numpy.float64]: | ||||||
|  |         """ | ||||||
|  |         All vertex x coords as a 1D ndarray | ||||||
|  |         """ | ||||||
|  |         return self.vertices[:, 0] | ||||||
|  | 
 | ||||||
|  |     def __init__( | ||||||
|  |             self, | ||||||
|  |             vertex_lists: Iterable[ArrayLike], | ||||||
|  |             *, | ||||||
|  |             offset: ArrayLike = (0.0, 0.0), | ||||||
|  |             rotation: float = 0.0, | ||||||
|  |             repetition: Repetition | None = None, | ||||||
|  |             annotations: annotations_t | None = None, | ||||||
|  |             raw: bool = False, | ||||||
|  |             ) -> None: | ||||||
|  |         if raw: | ||||||
|  |             assert isinstance(vertex_lists, list) | ||||||
|  |             assert all(isinstance(vv, numpy.ndarray) for vv in vertex_lists) | ||||||
|  |             assert isinstance(offset, numpy.ndarray) | ||||||
|  |             self._vertex_lists = vertex_lists | ||||||
|  |             self._offset = offset | ||||||
|  |             self._repetition = repetition | ||||||
|  |             self._annotations = annotations if annotations is not None else {} | ||||||
|  |         else: | ||||||
|  |             self.vertices = vertices | ||||||
|  |             self.offset = offset | ||||||
|  |             self.repetition = repetition | ||||||
|  |             self.annotations = annotations if annotations is not None else {} | ||||||
|  |         self.rotate(rotation) | ||||||
|  | 
 | ||||||
|  |     def __deepcopy__(self, memo: dict | None = None) -> 'PolyCollection': | ||||||
|  |         memo = {} if memo is None else memo | ||||||
|  |         new = copy.copy(self) | ||||||
|  |         new._offset = self._offset.copy() | ||||||
|  |         new._vertex_lists = [vv.copy() for vv in self._vertex_lists] | ||||||
|  |         new._annotations = copy.deepcopy(self._annotations) | ||||||
|  |         return new | ||||||
|  | 
 | ||||||
|  |     def __eq__(self, other: Any) -> bool: | ||||||
|  |         return ( | ||||||
|  |             type(self) is type(other) | ||||||
|  |             and numpy.array_equal(self.offset, other.offset) | ||||||
|  |             and all(numpy.array_equal(ss, oo) for ss, oo in zip(self.vertices, other.vertices)) | ||||||
|  |             and self.repetition == other.repetition | ||||||
|  |             and annotations_eq(self.annotations, other.annotations) | ||||||
|  |             ) | ||||||
|  | 
 | ||||||
|  |     def __lt__(self, other: Shape) -> bool: | ||||||
|  |         if type(self) is not type(other): | ||||||
|  |             if repr(type(self)) != repr(type(other)): | ||||||
|  |                 return repr(type(self)) < repr(type(other)) | ||||||
|  |             return id(type(self)) < id(type(other)) | ||||||
|  | 
 | ||||||
|  |         other = cast(PolyCollection, other) | ||||||
|  |         for vv, oo in zip(self.vertices, other.vertices): | ||||||
|  |             if not numpy.array_equal(vv, oo): | ||||||
|  |                 min_len = min(vv.shape[0], oo.shape[0]) | ||||||
|  |                 eq_mask = vv[:min_len] != oo[:min_len] | ||||||
|  |                 eq_lt = vv[:min_len] < oo[:min_len] | ||||||
|  |                 eq_lt_masked = eq_lt[eq_mask] | ||||||
|  |                 if eq_lt_masked.size > 0: | ||||||
|  |                     return eq_lt_masked.flat[0] | ||||||
|  |                 return vv.shape[0] < oo.shape[0] | ||||||
|  |         if len(self.vertex_lists) != len(other.vertex_lists): | ||||||
|  |             return len(self.vertex_lists) < len(other.vertex_lists): | ||||||
|  |         if not numpy.array_equal(self.offset, other.offset): | ||||||
|  |             return tuple(self.offset) < tuple(other.offset) | ||||||
|  |         if self.repetition != other.repetition: | ||||||
|  |             return rep2key(self.repetition) < rep2key(other.repetition) | ||||||
|  |         return annotations_lt(self.annotations, other.annotations) | ||||||
|  | 
 | ||||||
|  |     def pop_as_polygon(self, index: int) -> 'Polygon': | ||||||
|  |         """ | ||||||
|  |         Remove one polygon from the list, and return it as a `Polygon` object. | ||||||
|  | 
 | ||||||
|  |         Args: | ||||||
|  |             index: which polygon to pop | ||||||
|  |         """ | ||||||
|  |         verts = self.vertex_lists.pop(index) | ||||||
|  |         return Polygon( | ||||||
|  |             vertices=verts, | ||||||
|  |             offset=self.offset, | ||||||
|  |             repetition=self.repetition.copy(), | ||||||
|  |             annotations=copy.deepcopy(self.annotations), | ||||||
|  |             ) | ||||||
|  | 
 | ||||||
|  |     def to_polygons( | ||||||
|  |             self, | ||||||
|  |             num_vertices: int | None = None,      # unused  # noqa: ARG002 | ||||||
|  |             max_arclen: float | None = None,      # unused  # noqa: ARG002 | ||||||
|  |             ) -> list['Polygon']: | ||||||
|  |         return [Polygon( | ||||||
|  |             vertices=vv, | ||||||
|  |             offset=self.offset, | ||||||
|  |             repetition=self.repetition.copy(), | ||||||
|  |             annotations=copy.deepcopy(self.annotations), | ||||||
|  |             ) for vv in self.vertex_lists] | ||||||
|  | 
 | ||||||
|  |     def get_bounds_single(self) -> NDArray[numpy.float64]:         # TODO note shape get_bounds doesn't include repetition | ||||||
|  |         mins = [numpy.min(vv, axis=0) for vv self.vertex_lists] | ||||||
|  |         maxs = [numpy.max(vv, axis=0) for vv self.vertex_lists] | ||||||
|  |         return numpy.vstack((self.offset + numpy.min(self.vertex_lists, axis=0), | ||||||
|  |                              self.offset + numpy.max(self.vertex_lists, axis=0))) | ||||||
|  | 
 | ||||||
|  |     def rotate(self, theta: float) -> 'Polygon': | ||||||
|  |         if theta != 0: | ||||||
|  |             for vv in self.vertex_lists: | ||||||
|  |                 vv[:] = numpy.dot(rotation_matrix_2d(theta), vv.T).T | ||||||
|  |         return self | ||||||
|  | 
 | ||||||
|  |     def mirror(self, axis: int = 0) -> 'Polygon': | ||||||
|  |         for vv in self.vertex_lists: | ||||||
|  |             vv[:, axis - 1] *= -1 | ||||||
|  |         return self | ||||||
|  | 
 | ||||||
|  |     def scale_by(self, c: float) -> 'Polygon': | ||||||
|  |         for vv in self.vertex_lists: | ||||||
|  |             vv *= c | ||||||
|  |         return self | ||||||
|  | 
 | ||||||
|  |     def normalized_form(self, norm_value: float) -> normalized_shape_tuple: | ||||||
|  |         # Note: this function is going to be pretty slow for many-vertexed polygons, relative to | ||||||
|  |         #   other shapes | ||||||
|  |         meanv = numpy.concatenate(self.vertex_lists).mean(axis=0) | ||||||
|  |         zeroed_vertices = [vv - meanv for vv in self.vertex_lists] | ||||||
|  |         offset = meanv + self.offset | ||||||
|  | 
 | ||||||
|  |         scale = zeroed_vertices.std() | ||||||
|  |         normed_vertices = zeroed_vertices / scale | ||||||
|  | 
 | ||||||
|  |         _, _, vertex_axis = numpy.linalg.svd(zeroed_vertices) | ||||||
|  |         rotation = numpy.arctan2(vertex_axis[0][1], vertex_axis[0][0]) % (2 * pi) | ||||||
|  |         rotated_vertices = numpy.vstack([numpy.dot(rotation_matrix_2d(-rotation), v) | ||||||
|  |                                         for v in normed_vertices]) | ||||||
|  | 
 | ||||||
|  |         # Reorder the vertices so that the one with lowest x, then y, comes first. | ||||||
|  |         x_min = rotated_vertices[:, 0].argmin() | ||||||
|  |         if not is_scalar(x_min): | ||||||
|  |             y_min = rotated_vertices[x_min, 1].argmin() | ||||||
|  |             x_min = cast(Sequence, x_min)[y_min] | ||||||
|  |         reordered_vertices = numpy.roll(rotated_vertices, -x_min, axis=0) | ||||||
|  | 
 | ||||||
|  |         # TODO: normalize mirroring? | ||||||
|  | 
 | ||||||
|  |         return ((type(self), reordered_vertices.data.tobytes()), | ||||||
|  |                 (offset, scale / norm_value, rotation, False), | ||||||
|  |                 lambda: Polygon(reordered_vertices * norm_value)) | ||||||
|  | 
 | ||||||
|  |     def __repr__(self) -> str: | ||||||
|  |         centroid = self.offset + numpy.concatenate(self.vertex_lists).mean(axis=0) | ||||||
|  |         return f'<PolyCollection centroid {centroid} p{len(self.vertex_lists)}>' | ||||||
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