Add some docs for energy calculations
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@ -13,7 +13,62 @@ def poynting(e: fdfield_t,
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dxes: Optional[dx_lists_t] = None,
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) -> fdfield_t:
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"""
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Calculate the poynting vector
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Calculate the poynting vector `S` ($S$).
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This is the energy transfer rate (amount of energy `U` per `dt` transferred
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between adjacent cells) in each direction that happens during the half-step
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bounded by the two provided fields.
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The returned vector field `S` is the energy flow across +x, +y, and +z
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boundaries of the corresponding `U` cell. For example,
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```
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mx = numpy.roll(mask, -1, axis=0)
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my = numpy.roll(mask, -1, axis=1)
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mz = numpy.roll(mask, -1, axis=2)
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u_hstep = fdtd.energy_hstep(e0=es[ii - 1], h1=hs[ii], e2=es[ii], **args)
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u_estep = fdtd.energy_estep(h0=hs[ii], e1=es[ii], h2=hs[ii + 1], **args)
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delta_j_B = fdtd.delta_energy_j(j0=js[ii], e1=es[ii], dxes=dxes)
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du_half_h2e = u_estep - u_hstep - delta_j_B
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s_h2e = -fdtd.poynting(e=es[ii], h=hs[ii], dxes=dxes) * dt
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planes = [s_h2e[0, mask].sum(), -s_h2e[0, mx].sum(),
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s_h2e[1, mask].sum(), -s_h2e[1, my].sum(),
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s_h2e[2, mask].sum(), -s_h2e[2, mz].sum()]
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assert_close(sum(planes), du_half_h2e[mask])
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```
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(see `meanas.tests.test_fdtd.test_poynting_planes`)
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The full relationship is
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$$
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\\begin{aligned}
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(U_{l+\\frac{1}{2}} - U_l) / \\Delta_t
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&= -\\hat{\\nabla} \\cdot \\tilde{S}_{l, l + \\frac{1}{2}} \\ \\
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- \\hat{H}_{l+\\frac{1}{2}} \\cdot \\hat{M}_l \\ \\
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- \\tilde{E}_l \\cdot \\tilde{J}_{l+\\frac{1}{2}} \\\\
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(U_l - U_{l-\\frac{1}{2}}) / \\Delta_t
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&= -\\hat{\\nabla} \\cdot \\tilde{S}_{l, l - \\frac{1}{2}} \\ \\
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- \\hat{H}_{l-\\frac{1}{2}} \\cdot \\hat{M}_l \\ \\
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- \\tilde{E}_l \\cdot \\tilde{J}_{l-\\frac{1}{2}} \\\\
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\\end{aligned}
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$$
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These equalities are exact and should practically hold to within numerical precision.
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No time- or spatial-averaging is necessary. (See `meanas.fdtd` docs for derivation.)
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Args:
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e: E-field
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h: H-field (one half-timestep before or after `e`)
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dxes: Grid description; see `meanas.fdmath`.
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Returns:
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s: Vector field. Components indicate the energy transfer rate from the
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corresponding energy cell into its +x, +y, and +z neighbors during
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the half-step from the time of the earlier input field until the
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time of later input field.
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"""
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if dxes is None:
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dxes = tuple(tuple(numpy.ones(1) for _ in range(3)) for _ in range(2))
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@ -39,7 +94,24 @@ def poynting_divergence(s: Optional[fdfield_t] = None,
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dxes: Optional[dx_lists_t] = None,
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) -> fdfield_t:
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"""
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Calculate the divergence of the poynting vector
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Calculate the divergence of the poynting vector.
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This is the net energy flow for each cell, i.e. the change in energy `U`
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per `dt` caused by transfer of energy to nearby cells (rather than
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absorption/emission by currents `J` or `M`).
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See `poynting` and `meanas.fdtd` for more details.
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Args:
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s: Poynting vector, as calculated with `poynting`. Optional; caller
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can provide `e` and `h` instead.
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e: E-field (optional; need either `s` or both `e` and `h`)
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h: H-field (optional; need either `s` or both `e` and `h`)
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dxes: Grid description; see `meanas.fdmath`.
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Returns:
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ds: Divergence of the poynting vector.
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Entries indicate the net energy flow out of the corresponding
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energy cell.
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"""
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if s is None:
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assert(e is not None)
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@ -59,6 +131,22 @@ def energy_hstep(e0: fdfield_t,
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mu: Optional[fdfield_t] = None,
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dxes: Optional[dx_lists_t] = None,
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) -> fdfield_t:
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"""
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Calculate energy `U` at the time of the provided H-field `h1`.
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TODO: Figure out what this means spatially.
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Args:
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e0: E-field one half-timestep before the energy.
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h1: H-field (at the same timestep as the energy).
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e2: E-field one half-timestep after the energy.
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epsilon: Dielectric constant distribution.
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mu: Magnetic permeability distribution.
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dxes: Grid description; see `meanas.fdmath`.
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Returns:
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Energy, at the time of the H-field `h1`.
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"""
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u = dxmul(e0 * e2, h1 * h1, epsilon, mu, dxes)
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return u
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@ -70,6 +158,22 @@ def energy_estep(h0: fdfield_t,
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mu: Optional[fdfield_t] = None,
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dxes: Optional[dx_lists_t] = None,
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) -> fdfield_t:
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"""
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Calculate energy `U` at the time of the provided E-field `e1`.
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TODO: Figure out what this means spatially.
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Args:
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h0: H-field one half-timestep before the energy.
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e1: E-field (at the same timestep as the energy).
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h2: H-field one half-timestep after the energy.
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epsilon: Dielectric constant distribution.
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mu: Magnetic permeability distribution.
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dxes: Grid description; see `meanas.fdmath`.
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Returns:
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Energy, at the time of the E-field `e1`.
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"""
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u = dxmul(e1 * e1, h0 * h2, epsilon, mu, dxes)
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return u
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@ -84,7 +188,21 @@ def delta_energy_h2e(dt: float,
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dxes: Optional[dx_lists_t] = None,
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) -> fdfield_t:
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"""
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Change in energy during the half-step from `h1` to `e2`.
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This is just from (e2 * e2 + h3 * h1) - (h1 * h1 + e0 * e2)
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Args:
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e0: E-field one half-timestep before the start of the energy delta.
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h1: H-field at the start of the energy delta.
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e2: E-field at the end of the energy delta (one half-timestep after `h1`).
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h3: H-field one half-timestep after the end of the energy delta.
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epsilon: Dielectric constant distribution.
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mu: Magnetic permeability distribution.
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dxes: Grid description; see `meanas.fdmath`.
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Returns:
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Change in energy from the time of `h1` to the time of `e2`.
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"""
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de = e2 * (e2 - e0) / dt
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dh = h1 * (h3 - h1) / dt
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@ -102,7 +220,21 @@ def delta_energy_e2h(dt: float,
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dxes: Optional[dx_lists_t] = None,
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) -> fdfield_t:
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"""
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Change in energy during the half-step from `e1` to `h2`.
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This is just from (h2 * h2 + e3 * e1) - (e1 * e1 + h0 * h2)
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Args:
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h0: E-field one half-timestep before the start of the energy delta.
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e1: H-field at the start of the energy delta.
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h2: E-field at the end of the energy delta (one half-timestep after `e1`).
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e3: H-field one half-timestep after the end of the energy delta.
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epsilon: Dielectric constant distribution.
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mu: Magnetic permeability distribution.
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dxes: Grid description; see `meanas.fdmath`.
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Returns:
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Change in energy from the time of `e1` to the time of `h2`.
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"""
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de = e1 * (e3 - e1) / dt
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dh = h2 * (h2 - h0) / dt
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@ -114,6 +246,14 @@ def delta_energy_j(j0: fdfield_t,
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e1: fdfield_t,
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dxes: Optional[dx_lists_t] = None,
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) -> fdfield_t:
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"""
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Calculate
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Note that each value of $J$ contributes to the energy twice (i.e. once per field update)
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despite only causing the value of $E$ to change once (same for $M$ and $H$).
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"""
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if dxes is None:
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dxes = tuple(tuple(numpy.ones(1) for _ in range(3)) for _ in range(2))
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